Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4l02
         (233 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    26   0.15 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    26   0.20 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    22   2.5  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    21   4.4  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    21   7.7  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 94  HGCHRQFVHEYNSAS 50
           HGC R ++H +N AS
Sbjct: 953 HGCFRSYLHRFNRAS 967


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 94  HGCHRQFVHEYNSAS 50
           HGC R ++H+Y  AS
Sbjct: 890 HGCFRSYLHKYRHAS 904


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 41  KRLRGGVIFMDELPMTSVGKVARAK 115
           K+LRG  I +DE P   + K+   K
Sbjct: 3   KQLRGRTISVDERPAVVIRKLGSEK 27


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 20  NDKLSDSKRLRGGVI 64
           N+ LSD KR+  GVI
Sbjct: 290 NETLSDLKRVEDGVI 304


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 112 RAGHLSHGCHRQFVHEYN 59
           R G L +  HRQ V  YN
Sbjct: 229 RRGELFYYMHRQTVARYN 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,566
Number of Sequences: 2352
Number of extensions: 4060
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)