BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4k22
(382 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 1.8
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 22 1.8
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 3.1
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 3.1
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 4.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 4.2
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 4.2
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 5.5
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 5.5
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 20 7.3
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 20 7.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 7.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 7.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 11 LGLLGNFCYKPCILLIIICCATY 79
L +L F Y P IL + ATY
Sbjct: 321 LNILSIFTYVPMILYCVYTTATY 343
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 11 LGLLGNFCYKPCILLIIICCATY 79
L +L F Y P IL + ATY
Sbjct: 46 LNILSIFTYVPMILYCVYTTATY 68
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 16 FAWKFLL*TLY 48
F W FLL TLY
Sbjct: 278 FGWSFLLFTLY 288
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 16 FAWKFLL*TLY 48
F W FLL TLY
Sbjct: 204 FGWSFLLFTLY 214
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.0 bits (42), Expect = 4.2
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 68 CATYFTLVNLIAPKIEAFLVPTSVFSTT 151
C L+N++ + ++ VP STT
Sbjct: 380 CGPKNPLINILYANMNSYSVPEPTISTT 407
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 4.2
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 7 WVRFAWKFLL*TLYFVNNNLLCYLFY 84
W++ + + TLY N +C++ Y
Sbjct: 905 WLQLGYLIFVSTLYTANVVCICHVCY 930
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.0 bits (42), Expect = 4.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 279 SGATTNQHTTEHPMQC 326
+GAT HTT + C
Sbjct: 72 NGATCQDHTTHYTCHC 87
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 20.6 bits (41), Expect = 5.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 289 PRINTLPNTPC 321
PR+NT+ +T C
Sbjct: 347 PRVNTIKHTSC 357
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 20.6 bits (41), Expect = 5.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 289 PRINTLPNTPC 321
PR+NT+ +T C
Sbjct: 347 PRVNTIKHTSC 357
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 20.2 bits (40), Expect = 7.3
Identities = 7/29 (24%), Positives = 15/29 (51%)
Frame = +3
Query: 273 YESGATTNQHTTEHPMQCILSRSDFDLYY 359
YE+ ++ Q+TT+ P + + + Y
Sbjct: 896 YETSISSGQYTTKDPNEVTCDEEEGHISY 924
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 214 QKATEHVIGCVLCSPGCFSLFRG 236
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 528 QKATEHVIGCVLCSPGCFSLFRG 550
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 761 QKATEHVIGCVLCSPGCFSLFRG 783
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 761 QKATEHVIGCVLCSPGCFSLFRG 783
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
Q TEH + C+L S F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,152
Number of Sequences: 336
Number of extensions: 1835
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7908675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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