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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4k22
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   1.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   1.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   3.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   3.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   5.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   5.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   7.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    20   7.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   7.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   7.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   7.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   7.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 11  LGLLGNFCYKPCILLIIICCATY 79
           L +L  F Y P IL  +   ATY
Sbjct: 321 LNILSIFTYVPMILYCVYTTATY 343


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 11  LGLLGNFCYKPCILLIIICCATY 79
           L +L  F Y P IL  +   ATY
Sbjct: 46  LNILSIFTYVPMILYCVYTTATY 68


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 16  FAWKFLL*TLY 48
           F W FLL TLY
Sbjct: 278 FGWSFLLFTLY 288


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 16  FAWKFLL*TLY 48
           F W FLL TLY
Sbjct: 204 FGWSFLLFTLY 214


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +2

Query: 68  CATYFTLVNLIAPKIEAFLVPTSVFSTT 151
           C     L+N++   + ++ VP    STT
Sbjct: 380 CGPKNPLINILYANMNSYSVPEPTISTT 407


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 7   WVRFAWKFLL*TLYFVNNNLLCYLFY 84
           W++  +   + TLY  N   +C++ Y
Sbjct: 905 WLQLGYLIFVSTLYTANVVCICHVCY 930


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 279 SGATTNQHTTEHPMQC 326
           +GAT   HTT +   C
Sbjct: 72  NGATCQDHTTHYTCHC 87


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 289 PRINTLPNTPC 321
           PR+NT+ +T C
Sbjct: 347 PRVNTIKHTSC 357


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 289 PRINTLPNTPC 321
           PR+NT+ +T C
Sbjct: 347 PRVNTIKHTSC 357


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +3

Query: 273 YESGATTNQHTTEHPMQCILSRSDFDLYY 359
           YE+  ++ Q+TT+ P +      +  + Y
Sbjct: 896 YETSISSGQYTTKDPNEVTCDEEEGHISY 924


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 214 QKATEHVIGCVLCSPGCFSLFRG 236


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 528 QKATEHVIGCVLCSPGCFSLFRG 550


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 761 QKATEHVIGCVLCSPGCFSLFRG 783


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 761 QKATEHVIGCVLCSPGCFSLFRG 783


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 297 QHTTEHPMQCIL-SRSDFDLYYG 362
           Q  TEH + C+L S   F L+ G
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRG 810


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,152
Number of Sequences: 336
Number of extensions: 1835
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

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