Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4k22
(382 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 50 8e-07
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 47 4e-06
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 47 6e-06
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 45 2e-05
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 43 9e-05
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 35 0.025
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 34 0.033
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 33 0.10
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564... 32 0.18
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 30 0.71
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 30 0.71
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 29 0.94
09_04_0470 + 17875119-17875239,17875327-17875496,17875637-178757... 27 3.8
08_02_1024 - 23723560-23723693,23723835-23724041,23724183-237243... 27 3.8
08_02_0611 + 19317969-19318778 27 3.8
03_02_0425 + 8353009-8354703 27 3.8
11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683... 27 5.0
08_01_0273 - 2203828-2204124,2204812-2205072,2205161-2205296,220... 27 6.6
07_03_1232 + 25052415-25052918 27 6.6
02_05_1040 - 33709588-33709880,33709960-33710200,33710498-337106... 27 6.6
07_03_0734 + 21067747-21068569,21069678-21069812,21069967-210701... 26 8.7
06_01_1093 - 8970996-8971667,8971756-8971902,8971982-8972118,897... 26 8.7
04_02_0003 + 8420895-8421580,8421649-8421895 26 8.7
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 49.6 bits (113), Expect = 8e-07
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Frame = +3
Query: 174 HEGVSCDSCLKNNFRGRRYKCLIC---IDYDLCATCYES-----GATTNQHTTEHPMQ 323
H GV CDSC RG+RYKC C I +DLC CY + G HT +H M+
Sbjct: 234 HIGVGCDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTKSKLPGRFNQHHTPDHRME 291
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 47.2 bits (107), Expect = 4e-06
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 189 CDSCLKNNFRGRRYKCLICIDYDLCATCYE---SGATTNQHTTEHPMQCILSRSDFDLYY 359
CD C RR+ C IC D+DLC TCYE + H+ +HPM I D +
Sbjct: 2609 CDGCSTVPILRRRWHCNICPDFDLCETCYEILDADRLPAPHSRDHPMSAIPIELD---TF 2665
Query: 360 GGE 368
GGE
Sbjct: 2666 GGE 2668
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 46.8 bits (106), Expect = 6e-06
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 144 QRRSLAKMNRHEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 305
+ S+A+ H + CD C G RYK I DYDLC TC+ N++T
Sbjct: 450 KHESMAQHTLHRWIQCDGCGVTPIAGSRYKSNIKDDYDLCNTCFSRMGNVNEYT 503
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +3
Query: 165 MNRHEGVSCDSCLKNNFRGRRYKCLIC--IDYDLCATCYESGATT-----NQHTTEHPMQ 323
++ H GV CD C +GRRY C C DLC C+ +G+T +HT +H M+
Sbjct: 495 LHTHVGVGCDGCGVFPIQGRRYSCKECEAPGLDLCEKCFMTGSTAEGRFDQKHTADHDME 554
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 42.7 bits (96), Expect = 9e-05
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 189 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFDL 353
C+ C K+ R KC C D+DLC C+ GA H + HP + ++ F L
Sbjct: 53 CNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYR-VMDNLSFPL 106
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 34.7 bits (76), Expect = 0.025
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 174 HEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 305
H + CD C G RYK DYDLC C+ ++T
Sbjct: 425 HRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYT 468
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 34.3 bits (75), Expect = 0.033
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 189 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 284
C+SC + R +RY C D+DLC CY+ G
Sbjct: 277 CNSCSVDCSR-KRYHCRTQADFDLCCDCYDKG 307
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 32.7 bits (71), Expect = 0.10
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 189 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 284
C+SC + + +RY C D+DLC+ CY G
Sbjct: 286 CNSCSVDCSK-KRYHCRTQADFDLCSDCYNEG 316
>03_04_0044 +
16754638-16754676,16755472-16755598,16756325-16756451,
16756866-16757431,16757896-16758211,16758373-16758613,
16758734-16758823,16759343-16759780,16759877-16760185,
16760392-16760406
Length = 755
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 278 LVASSAQVVIDANQTFVSSSSKVIFQTRITADSFMAI--HFRQRTSLKKHLL 129
+V SSA +D NQ ++ SK + QT ++ D + I H R S + HL+
Sbjct: 309 VVHSSAASSVDGNQAHMAGLSKKLSQTNVSEDEHVIIPAHLRVPDSERTHLI 360
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 29.9 bits (64), Expect = 0.71
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 189 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 302
CD+C K G RY CL C D ++ C + +T H
Sbjct: 294 CDAC-KEPGDGPRYHCLTCEDLNMHKFCAHAPSTLYHH 330
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 29.9 bits (64), Expect = 0.71
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 174 HEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYES 281
H SC C GRR+ C C + +C CY +
Sbjct: 1265 HLQYSCSHCCTFMVSGRRWVCNECKSFYICDRCYNA 1300
>02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 29.5 bits (63), Expect = 0.94
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 174 HEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYES 281
H SC C G+R+ C C + +C CY++
Sbjct: 1367 HLQYSCSHCCTLMVSGKRWVCHQCRSFYICDKCYDA 1402
>09_04_0470 +
17875119-17875239,17875327-17875496,17875637-17875784,
17876491-17876697,17877550-17877656
Length = 250
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 243 CIDYDLCATCYESGATTNQHTTEHPMQCILSR 338
C D+ + C+ +GAT H +HP +LS+
Sbjct: 93 CDDFSIGVFCFPAGATLPLH--DHPQMVVLSK 122
>08_02_1024 -
23723560-23723693,23723835-23724041,23724183-23724327,
23724440-23724615,23724713-23724851
Length = 266
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 243 CIDYDLCATCYESGATTNQHTTEHPMQCILSR 338
C D+ + C+ +GAT H +HP +LS+
Sbjct: 101 CADFSMGVFCFPAGATLPLH--DHPEMVVLSK 130
>08_02_0611 + 19317969-19318778
Length = 269
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 189 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 302
CD C + G RY+C C ++DL C AT QH
Sbjct: 33 CDGCQEPGGDGPRYRCAPC-NFDLHTDCALPPATL-QH 68
>03_02_0425 + 8353009-8354703
Length = 564
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 11 LGLLGNFCYKPCILLIIICCA 73
L LLGN + P +LL+I+ CA
Sbjct: 3 LTLLGNCIHHPVLLLVILACA 23
>11_04_0351 +
16666398-16666532,16666911-16667048,16667398-16668306,
16668383-16668511,16668774-16668996,16669085-16669231,
16669332-16669573,16669660-16669689,16669784-16669865,
16669968-16670128,16670775-16670898,16671206-16671414
Length = 842
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 4 GWVRFAWKFLL*TLYFVNNNLLCYLFYISKFNSS 105
GW F W + + ++ L+CYL ++KFN S
Sbjct: 754 GWAGFIWLYNF--VLLLSLMLICYLCNLAKFNIS 785
>08_01_0273 -
2203828-2204124,2204812-2205072,2205161-2205296,
2205438-2205656,2206130-2206323,2206339-2206505,
2206862-2207132,2207740-2207784
Length = 529
Score = 26.6 bits (56), Expect = 6.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GWVRFAWKFLL*TLYFVNNNLLCYLFYISKFNSSQNRGLFGANKCFFNDVLWR 162
G+++F +K +L T+ + +L +K L A +CF+N+V WR
Sbjct: 310 GYMKFFYKKVLTTMKSIETDLK---LQGNKHVDYVKNLLIDATRCFYNEVKWR 359
>07_03_1232 + 25052415-25052918
Length = 167
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 189 CDSCLKNNFRGRR-YKCLICIDYDLCATC 272
CD+C + GR Y+C+ C D+D+ A C
Sbjct: 84 CDACRVASHAGRCVYRCVAC-DFDVHARC 111
>02_05_1040 -
33709588-33709880,33709960-33710200,33710498-33710672,
33710781-33710892,33711906-33712145,33712253-33712436
Length = 414
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 4 GWVR--FAWKFLL*TLYFVNNNLLCYLFYISKFNS 102
GW+ F W ++ ++FV N ++ + ISKF S
Sbjct: 115 GWMAKIFCWVVIVFLMFFVPNGVVSFYESISKFGS 149
>07_03_0734 +
21067747-21068569,21069678-21069812,21069967-21070100,
21070182-21070449,21070472-21070709,21070787-21070937,
21071040-21071387
Length = 698
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +3
Query: 186 SCDSCLKNNFRGRRYKCL----ICIDYDLC 263
+C+SC+ N F+G + C + I YDLC
Sbjct: 87 ACESCVDNAFQGGQQLCPYNKDVFIVYDLC 116
>06_01_1093 -
8970996-8971667,8971756-8971902,8971982-8972118,
8972343-8972612,8972731-8972868,8974965-8975394
Length = 597
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 47 ILLIIICCATYFTLVNLIAPKIEAFLVPTSVFSTTF 154
IL+I I +FT + + PK++A+ VF TF
Sbjct: 181 ILIISIFIVAFFTTLTKLHPKMKAYEYGFRVFLLTF 216
>04_02_0003 + 8420895-8421580,8421649-8421895
Length = 310
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 287 SAGLVASSAQVVIDANQTFVSSSSKVIF 204
+ G+ SS+ V++D N SSSS IF
Sbjct: 112 TGGIFQSSSAVILDGNTRLCSSSSYSIF 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,449,757
Number of Sequences: 37544
Number of extensions: 165689
Number of successful extensions: 364
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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