Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4k21
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.2  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   5.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.5  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 518 KLSRRQVDFLIHALLN 565
           KL+ R +DFL H L N
Sbjct: 138 KLAARYIDFLYHVLSN 153


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 254 FCLKSHQALARFPIFFFGRS 195
           F ++ H   A+FPI+ +  S
Sbjct: 385 FAIRQHAVTAKFPIYLYRMS 404


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 440  VINMFLNDEIENDKIYKLVETVDSSNKLSRRQ 535
            +IN+  + E+ N ++  + +T+D S  +SRR+
Sbjct: 1134 LINIADSLEMLNKRLDHIEKTIDPSGHISRRR 1165


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 440  VINMFLNDEIENDKIYKLVETVDSSNKLSRRQ 535
            +IN+  + E+ N ++  + +T+D S  +SRR+
Sbjct: 1134 LINIADSLEMLNKRLDHIEKTIDPSGHISRRR 1165


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 440  VINMFLNDEIENDKIYKLVETVDSSNKLSRRQ 535
            +IN+  + E+ N ++  + +T+D S  +SRR+
Sbjct: 1134 LINIADSLEMLNKRLDHIEKTIDPSGHISRRR 1165


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 440  VINMFLNDEIENDKIYKLVETVDSSNKLSRRQ 535
            +IN+  + E+ N ++  + +T+D S  +SRR+
Sbjct: 1134 LINIADSLEMLNKRLDHIEKTIDPSGHISRRR 1165


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 254 FCLKSHQALARFPIFFF 204
           F ++ H   A+FPI+ +
Sbjct: 383 FAIRQHAVTAKFPIYLY 399


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 254 FCLKSHQALARFPIFFFGRS 195
           F ++ H   A+FPI+ +  S
Sbjct: 383 FAIRQHAITAKFPIYLYRMS 402


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 254 FCLKSHQALARFPIFFFGRS 195
           F ++ H   A+FPI+ +  S
Sbjct: 385 FAIRQHAITAKFPIYLYRMS 404


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 130 DDDNEHEKQYXQIQKDAV 77
           D D  ++K+Y + QKD V
Sbjct: 111 DPDGTYKKRYFESQKDEV 128


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 216 NFFFRTLLAL*LGMSSTLDSVFLLIMAGLTTIMN 115
           N++ R ++ +   M+STL+ +FLLI      I N
Sbjct: 91  NWYPRLIIGI---MNSTLNLIFLLIQTRFEMINN 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,163
Number of Sequences: 336
Number of extensions: 2633
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)