Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4k21
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       30   2.6  
AE014298-1550|AAF47996.2|  557|Drosophila melanogaster CG1961-PA...    29   8.0  
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ...    29   8.0  

>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = +2

Query: 386  WLCE--QVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSR 529
            WL +  +++P +  S++   +IN  LND+I+ D IY+L+E   S  KL R
Sbjct: 1235 WLADPKELWPRQQ-SVEEPVLINTVLNDKID-DPIYELIERYSSIEKLIR 1282


>AE014298-1550|AAF47996.2|  557|Drosophila melanogaster CG1961-PA
           protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 240 ASSACSISNFFFRTLLAL*LGMSSTLDSVFLLIMAGLTTIMNTRNNMXR 94
           A+  C++ NFF   ++   +GM+S  + V+  + AGL  I   R  + R
Sbjct: 358 AAGECNLGNFFCDAMVHSFVGMASYEEKVWTNVSAGLMNIGGLRVPLNR 406


>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
           protein.
          Length = 2779

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/39 (33%), Positives = 28/39 (71%)
 Frame = +2

Query: 149 KNTESNVEDIPSHKAKSVRKKKLEIEQALDAILNKNTSS 265
           ++TESN   +     + + ++KLE++QAL+A+L+ ++S+
Sbjct: 567 QSTESN-NPLQLETIRLLEEQKLELQQALEALLSSSSSA 604


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,493,284
Number of Sequences: 53049
Number of extensions: 446720
Number of successful extensions: 1185
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)