Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4k09
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036884-1|AAH36884.1| 884|Homo sapiens ZNF462 protein protein. 31 4.3
AL512593-2|CAI14942.1| 931|Homo sapiens zinc finger protein 462... 31 4.3
AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462... 31 4.3
AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein. 31 4.3
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 31 5.7
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 31 5.7
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 31 5.7
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 31 5.7
U52682-1|AAC50779.1| 450|Homo sapiens lymphocyte specific inter... 30 10.0
D78261-1|BAA11335.1| 440|Homo sapiens ICSAT transcription facto... 30 10.0
BC015752-1|AAH15752.1| 451|Homo sapiens interferon regulatory f... 30 10.0
AL589962-1|CAH71554.1| 451|Homo sapiens interferon regulatory f... 30 10.0
AL365272-3|CAH72537.1| 451|Homo sapiens interferon regulatory f... 30 10.0
>BC036884-1|AAH36884.1| 884|Homo sapiens ZNF462 protein protein.
Length = 884
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 405 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 527
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 750 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 789
>AL512593-2|CAI14942.1| 931|Homo sapiens zinc finger protein 462
protein.
Length = 931
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 405 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 527
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 797 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 836
>AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462
protein.
Length = 1411
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 405 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 527
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 1277 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 1316
>AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.
Length = 1412
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 405 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 527
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 1278 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 1317
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/95 (23%), Positives = 45/95 (47%)
Frame = -1
Query: 311 SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 132
+VV +D + + + N+ ++ S KL V+ + ID S V + +
Sbjct: 149 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 206
Query: 131 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 27
+ F +N+ T+Y+SN+ +VL+ S++ V+
Sbjct: 207 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 241
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/95 (23%), Positives = 45/95 (47%)
Frame = -1
Query: 311 SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 132
+VV +D + + + N+ ++ S KL V+ + ID S V + +
Sbjct: 133 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 190
Query: 131 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 27
+ F +N+ T+Y+SN+ +VL+ S++ V+
Sbjct: 191 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 225
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/95 (23%), Positives = 45/95 (47%)
Frame = -1
Query: 311 SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 132
+VV +D + + + N+ ++ S KL V+ + ID S V + +
Sbjct: 149 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 206
Query: 131 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 27
+ F +N+ T+Y+SN+ +VL+ S++ V+
Sbjct: 207 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 241
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/95 (23%), Positives = 45/95 (47%)
Frame = -1
Query: 311 SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 132
+VV +D + + + N+ ++ S KL V+ + ID S V + +
Sbjct: 149 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 206
Query: 131 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 27
+ F +N+ T+Y+SN+ +VL+ S++ V+
Sbjct: 207 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 241
>U52682-1|AAC50779.1| 450|Homo sapiens lymphocyte specific
interferon regulatory factor/interferon regulatory
factor 4 protein.
Length = 450
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 465 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 632
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 284 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 343
Query: 633 KRGN 644
R N
Sbjct: 344 DRPN 347
>D78261-1|BAA11335.1| 440|Homo sapiens ICSAT transcription factor
protein.
Length = 440
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 465 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 632
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 315 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 374
Query: 633 KRGN 644
R N
Sbjct: 375 DRPN 378
>BC015752-1|AAH15752.1| 451|Homo sapiens interferon regulatory
factor 4 protein.
Length = 451
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 465 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 632
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 285 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 344
Query: 633 KRGN 644
R N
Sbjct: 345 DRPN 348
>AL589962-1|CAH71554.1| 451|Homo sapiens interferon regulatory
factor 4 protein.
Length = 451
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 465 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 632
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 285 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 344
Query: 633 KRGN 644
R N
Sbjct: 345 DRPN 348
>AL365272-3|CAH72537.1| 451|Homo sapiens interferon regulatory
factor 4 protein.
Length = 451
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 465 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 632
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 285 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 344
Query: 633 KRGN 644
R N
Sbjct: 345 DRPN 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,768,262
Number of Sequences: 237096
Number of extensions: 1935107
Number of successful extensions: 4327
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4323
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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