Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4k09
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128431-1|AAM75024.1|  667|Drosophila melanogaster GM10569p pro...    29   5.0  
AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA...    29   5.0  
AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD...    29   8.7  
AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB...    29   8.7  

>AY128431-1|AAM75024.1|  667|Drosophila melanogaster GM10569p
           protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 33/148 (22%), Positives = 57/148 (38%), Gaps = 5/148 (3%)
 Frame = +3

Query: 261 IVSSVRKRVVYAHANN-RAVHIYY-ISYIL*NTSIRLEPQQTAHVGSMATKRKIGDSSSD 434
           ++    K + Y +  N   +H+   IS+ L N  +   P   A V S    +K G+    
Sbjct: 136 LIVRATKHIYYTYMQNTEPLHLSAAISHFL-NCLLTNGPVNPA-VSSEEAHKKRGNGGKH 193

Query: 435 DNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTKMLWQE 614
            N+ K  +   G+ QQ    N N  ++ +            TP S+  + R+  K+ W  
Sbjct: 194 -NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDW 252

Query: 615 QM---AINVKRGNFSILNCSCFEGRFLK 689
           ++   +I      + IL  S      LK
Sbjct: 253 ELDCDSIETAVSKYGILRISLMRAFCLK 280


>AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA
            protein.
          Length = 1448

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 33/148 (22%), Positives = 57/148 (38%), Gaps = 5/148 (3%)
 Frame = +3

Query: 261  IVSSVRKRVVYAHANN-RAVHIYY-ISYIL*NTSIRLEPQQTAHVGSMATKRKIGDSSSD 434
            ++    K + Y +  N   +H+   IS+ L N  +   P   A V S    +K G+    
Sbjct: 917  LIVRATKHIYYTYMQNTEPLHLSAAISHFL-NCLLTNGPVNPA-VSSEEAHKKRGNGGKH 974

Query: 435  DNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTKMLWQE 614
             N+ K  +   G+ QQ    N N  ++ +            TP S+  + R+  K+ W  
Sbjct: 975  -NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDW 1033

Query: 615  QM---AINVKRGNFSILNCSCFEGRFLK 689
            ++   +I      + IL  S      LK
Sbjct: 1034 ELDCDSIETAVSKYGILRISLMRAFCLK 1061


>AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD,
           isoform D protein.
          Length = 1851

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
 Frame = +3

Query: 354 SIRLEPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESGEDQQLV--PYNNNNGAAFNVK 527
           S+ +EP+   H    AT  +  DSSS    P R R + G        P ++ NG   N  
Sbjct: 211 SLPVEPKSHHHQHHQATNARSDDSSSSSPSPTRRRNKPGGAPAATDPPSSSANG---NSS 267

Query: 528 HDETGVMCYFTPSSVQLEPRELTKML 605
             ET      T    +  P E+ K L
Sbjct: 268 AYETAATTVMTHDQQRDPPVEVPKAL 293


>AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB,
           isoform B protein.
          Length = 2197

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
 Frame = +3

Query: 354 SIRLEPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESGEDQQLV--PYNNNNGAAFNVK 527
           S+ +EP+   H    AT  +  DSSS    P R R + G        P ++ NG   N  
Sbjct: 557 SLPVEPKSHHHQHHQATNARSDDSSSSSPSPTRRRNKPGGAPAATDPPSSSANG---NSS 613

Query: 528 HDETGVMCYFTPSSVQLEPRELTKML 605
             ET      T    +  P E+ K L
Sbjct: 614 AYETAATTVMTHDQQRDPPVEVPKAL 639


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,465,237
Number of Sequences: 53049
Number of extensions: 599665
Number of successful extensions: 1935
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)