Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4k09
(737 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.18
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 5.2
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 5.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 5.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 6.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.1
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 27.1 bits (57), Expect = 0.18
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -1
Query: 458 SFPLWLVVVAARIANLAFSCHATDVRCLLWFKSN*SVSQNIRYIIN 321
+FP+W V + AR+ L+ + RC + + VS N +++
Sbjct: 904 TFPVWQVTLNARLVELSLGSNPWSCRCKFLQELSSWVSDNAHKVVD 949
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK + S + ++ KRER S E + + +NN
Sbjct: 57 RKYRERSKERSRDKRERERSKERKIISSLSNN 88
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK + S + ++ KRER S E + + +NN
Sbjct: 57 RKYRERSKERSRDKRERERSKERKIISSLSNN 88
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIISSLSNN 88
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 197 VLKRLSNGFIDKSVDVGSISELQKFN 120
++ L G I + + GSISE QKF+
Sbjct: 413 IVSGLITGLIMRVLICGSISEEQKFD 438
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ +RER S E + + +NN
Sbjct: 57 RKYRETSKERSRDRRERERSKEPKIVSSLSNN 88
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 100 VSRFILKLNFCNSLIEP 150
+S L L +CNSL+ P
Sbjct: 408 LSSLFLWLGYCNSLLNP 424
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ ++ER +S E + + +NN
Sbjct: 57 RKYRETSKERSRDRKEREKSKEHKIISSLSNN 88
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ ++ER +S E + + +NN
Sbjct: 57 RKYRETSKERSRDRKEREKSKEHKIISSLSNN 88
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 408 RKIGDSSSDDNQPKRERVESGEDQQLVPYNNN 503
RK ++S + ++ ++ER +S E + + +NN
Sbjct: 57 RKYRETSKERSRDRKEREKSKEHKIISSLSNN 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,195
Number of Sequences: 438
Number of extensions: 4086
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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