Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4k04
(546 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 91 2e-17
UniRef50_UPI00015B51E6 Cluster: PREDICTED: similar to CG17888-PC... 87 2e-16
UniRef50_UPI0000D55B8C Cluster: PREDICTED: similar to CG17888-PC... 87 3e-16
UniRef50_Q16534 Cluster: Hepatic leukemia factor; n=24; Euteleos... 65 9e-10
UniRef50_UPI00005ED4B8 Cluster: PREDICTED: similar to thyrotroph... 55 9e-07
UniRef50_Q10587 Cluster: Thyrotroph embryonic factor; n=57; Eute... 54 3e-06
UniRef50_UPI000058687F Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_Q8MY13 Cluster: PAR domain subfamily bZIP; n=1; Crassos... 49 6e-05
UniRef50_Q10586 Cluster: D site-binding protein; n=12; Eutheria|... 43 0.004
UniRef50_Q4H2Q3 Cluster: Transcription factor protein; n=1; Cion... 39 0.066
UniRef50_A6CFT9 Cluster: Iduronate-2-sulfatase; n=1; Planctomyce... 38 0.15
UniRef50_Q3ISP1 Cluster: DNA polymerase; n=1; Natronomonas phara... 36 0.46
UniRef50_Q8LNA3 Cluster: Putative uncharacterized protein OSJNBa... 34 1.9
UniRef50_Q14257 Cluster: Reticulocalbin-2 precursor; n=26; Tetra... 34 1.9
UniRef50_Q5V184 Cluster: DNA polymerase B elongation subunit; n=... 34 2.5
UniRef50_UPI0001554CD6 Cluster: PREDICTED: similar to novel KRAB... 28 3.0
UniRef50_A1K2I4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.3
UniRef50_Q2GQQ5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_A5WF65 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A4FEI9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_UPI0000D664F5 Cluster: PREDICTED: hypothetical protein ... 32 7.5
UniRef50_UPI0000EBED90 Cluster: PREDICTED: similar to OSBP-relat... 32 9.9
UniRef50_UPI0000D9CB1F Cluster: PREDICTED: hypothetical protein;... 32 9.9
UniRef50_Q4THE9 Cluster: Chromosome undetermined SCAF2988, whole... 32 9.9
UniRef50_Q75IT5 Cluster: Putative uncharacterized protein OSJNBb... 32 9.9
UniRef50_Q8I5S9 Cluster: Putative uncharacterized protein; n=9; ... 32 9.9
UniRef50_A2DS14 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_Q5KHS4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_Q09813 Cluster: Putative transcription initiation facto... 32 9.9
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 91.1 bits (216), Expect = 2e-17
Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 9/82 (10%)
Frame = +1
Query: 304 KKYGKSV-NTKETL--EDK-KDDNDLW--EAQAAFLGPNLWDKTLPYDPDLK---YVDLD 456
K GKS N+KE + +DK K++ D+W EAQ AFLGPNLWDKTLPYD DLK Y DLD
Sbjct: 409 KSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLPYDADLKVTQYADLD 468
Query: 457 EFLSENGMPGEGLGSTHLGGSA 522
EFLSEN +P +GL THLG S+
Sbjct: 469 EFLSENNIP-DGLPGTHLGHSS 489
>UniRef50_UPI00015B51E6 Cluster: PREDICTED: similar to CG17888-PC;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG17888-PC - Nasonia vitripennis
Length = 433
Score = 87.4 bits (207), Expect = 2e-16
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 8/72 (11%)
Frame = +1
Query: 331 KETLEDKKD-DNDLW---EAQAAFLGPNLWDKTLPYDPDLK----YVDLDEFLSENGMPG 486
K+ ++KKD D +LW EAQAAFLGPNLWDKTLPYD DLK YVDLDEFLSENG+P
Sbjct: 207 KDGPDEKKDADGELWGNVEAQAAFLGPNLWDKTLPYDADLKVLNHYVDLDEFLSENGIPV 266
Query: 487 EGLGSTHLGGSA 522
+G+ GG A
Sbjct: 267 DGVAGGGGGGGA 278
>UniRef50_UPI0000D55B8C Cluster: PREDICTED: similar to CG17888-PC,
isoform C, partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to CG17888-PC, isoform C, partial -
Tribolium castaneum
Length = 264
Score = 86.6 bits (205), Expect = 3e-16
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +1
Query: 262 INGNDFLSHGASFXKKYGKSVNTKETLEDKKDDNDLW---EAQAAFLGPNLWDKTLPYDP 432
+NGN +H K + +DKKDD +LW EAQ AFLGPNLWDKT Y+
Sbjct: 64 MNGNSKPTHPHGHGHSTIKDLAGSILGDDKKDDGELWNNVEAQTAFLGPNLWDKT--YET 121
Query: 433 DLKYVDLDEFLSENGMPGEGLGS 501
DLKYVDLDEFLSENG+ +GLGS
Sbjct: 122 DLKYVDLDEFLSENGVSMDGLGS 144
>UniRef50_Q16534 Cluster: Hepatic leukemia factor; n=24;
Euteleostomi|Rep: Hepatic leukemia factor - Homo sapiens
(Human)
Length = 295
Score = 65.3 bits (152), Expect = 9e-10
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +1
Query: 310 YGKSVNTKETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGM 480
+ K + ++ L+D + N Q+AFLGP LWDKTLPYD D L+Y+DL+EFLSENG+
Sbjct: 40 FSKDKDKEKKLDD--ESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGI 97
Query: 481 P 483
P
Sbjct: 98 P 98
>UniRef50_UPI00005ED4B8 Cluster: PREDICTED: similar to thyrotroph
embryonic factor isoform 1; n=2; Monodelphis
domestica|Rep: PREDICTED: similar to thyrotroph
embryonic factor isoform 1 - Monodelphis domestica
Length = 302
Score = 55.2 bits (127), Expect = 9e-07
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 57 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 113
Query: 502 THLGGSAFGPALGL 543
THL +A P + L
Sbjct: 114 THLIQNALLPGIEL 127
>UniRef50_Q10587 Cluster: Thyrotroph embryonic factor; n=57;
Euteleostomi|Rep: Thyrotroph embryonic factor - Homo
sapiens (Human)
Length = 303
Score = 53.6 bits (123), Expect = 3e-06
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>UniRef50_UPI000058687F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 307
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/37 (64%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +1
Query: 373 EAQAAFLGPNLWDKTLPYDP-DLKYVDLDEFLSENGM 480
+ +AFLGP LW+KT PYD L+Y+DLDEFLSENG+
Sbjct: 59 DVASAFLGPTLWEKT-PYDDLKLEYMDLDEFLSENGI 94
>UniRef50_Q8MY13 Cluster: PAR domain subfamily bZIP; n=1;
Crassostrea gigas|Rep: PAR domain subfamily bZIP -
Crassostrea gigas (Pacific oyster) (Crassostrea
angulata)
Length = 260
Score = 49.2 bits (112), Expect = 6e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1
Query: 343 EDKKDDNDLWEAQAAFLGPNLWDKTLPYDPDLKYVDLDEFLSENGMPGEGLGSTHLGG 516
E K +++ +AFLGPNLW+ D +L+++DLDEFLSE GM G G S G
Sbjct: 32 EKGKTATGRFDSSSAFLGPNLWNNPENNDFNLEFMDLDEFLSETGM-GSGDNSNSSEG 88
>UniRef50_Q10586 Cluster: D site-binding protein; n=12;
Eutheria|Rep: D site-binding protein - Homo sapiens
(Human)
Length = 325
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>UniRef50_Q4H2Q3 Cluster: Transcription factor protein; n=1; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 389
Score = 39.1 bits (87), Expect = 0.066
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 325 NTKETLEDKKDD-NDLWEAQAAFLGPNLW-DKTLPYDPDLKYVDLDEFLSENGMPGE 489
N E E+K + ++ + +A+LGP +W D L D L+ VDLD+ L EN + GE
Sbjct: 34 NNDEKCEEKCGEASEQTDLASAYLGPQIWNDMLLSDDLKLEPVDLDDLLKENDVNGE 90
>UniRef50_A6CFT9 Cluster: Iduronate-2-sulfatase; n=1; Planctomyces
maris DSM 8797|Rep: Iduronate-2-sulfatase - Planctomyces
maris DSM 8797
Length = 489
Score = 37.9 bits (84), Expect = 0.15
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +1
Query: 190 RSSPSLTDTPLKTYIGRHDDDYPLINGNDFLS-HGASFXKKYGKSVNTKETLEDKKDD-- 360
+ P+ P + RHDDD P++N N L + A + + V + + D
Sbjct: 141 QGDPASWSVPAVMHFARHDDDQPMLNDNRELPVNLAKAPRSESRDVPDSAYFDGRIGDLA 200
Query: 361 ----NDLWEAQAA-FLGPNLWDKTLPYDPDLKYVDL 453
DL + Q FL W LP++P KY DL
Sbjct: 201 VKALQDLKQKQQPFFLAVGFWKPHLPFNPPKKYWDL 236
>UniRef50_Q3ISP1 Cluster: DNA polymerase; n=1; Natronomonas
pharaonis DSM 2160|Rep: DNA polymerase - Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678)
Length = 1740
Score = 36.3 bits (80), Expect = 0.46
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 340 LEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPDLKYVDLDEFLSENGMPGEG--LGSTHLG 513
L K++ + WE A+F+G L D T P D YV L + E +P +G G + G
Sbjct: 440 LNRKQNIVEFWEEVASFVGCKLEDATTPGDAVDMYV-LHKIHGEFALPSKGHQEGEEYEG 498
Query: 514 GSAFGPALGL 543
G+ F P G+
Sbjct: 499 GAVFDPISGV 508
>UniRef50_Q8LNA3 Cluster: Putative uncharacterized protein
OSJNBa0047G15.24; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0047G15.24 - Oryza sativa subsp. japonica (Rice)
Length = 146
Score = 34.3 bits (75), Expect = 1.9
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 158 TGLRLDTRTLSGRRAG-PAHTRARPTSGPRLARRLNTPSSWTSLRARPRWRC 6
TG+ T LSGR A P R R SGPRL RRL P++ SL R C
Sbjct: 22 TGVDSATIVLSGRAARKPRQPRRRRQSGPRLRRRLR-PAASASLAEDARDEC 72
>UniRef50_Q14257 Cluster: Reticulocalbin-2 precursor; n=26;
Tetrapoda|Rep: Reticulocalbin-2 precursor - Homo sapiens
(Human)
Length = 317
Score = 34.3 bits (75), Expect = 1.9
Identities = 21/90 (23%), Positives = 39/90 (43%)
Frame = +1
Query: 223 KTYIGRHDDDYPLINGNDFLSHGASFXKKYGKSVNTKETLEDKKDDNDLWEAQAAFLGPN 402
K + + D P ++ +F++ Y +E LE+ + D + + FLG
Sbjct: 156 KRFEKANQDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGDY 215
Query: 403 LWDKTLPYDPDLKYVDLDEFLSENGMPGEG 492
WD T DP+ V+ D F+++ +G
Sbjct: 216 RWDPTANEDPEWILVEKDRFVNDYDKDNDG 245
>UniRef50_Q5V184 Cluster: DNA polymerase B elongation subunit; n=2;
Halobacteriaceae|Rep: DNA polymerase B elongation
subunit - Haloarcula marismortui (Halobacterium
marismortui)
Length = 1388
Score = 33.9 bits (74), Expect = 2.5
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 340 LEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPDLKYVDLDEFLSENGMPGEGL--GSTHLG 513
L+ ++D D W+ F+G L D T P D YV L + E +P +G + G
Sbjct: 465 LDREQDIIDFWDEVRTFVGCKLEDATTPGDAVDMYV-LHKLHGEFALPSKGQQESEDYEG 523
Query: 514 GSAFGPALGL 543
G+ F P G+
Sbjct: 524 GAVFDPITGV 533
>UniRef50_UPI0001554CD6 Cluster: PREDICTED: similar to novel KRAB
box and zinc finger, C2H2 type domain containing
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to novel KRAB box and zinc finger,
C2H2 type domain containing protein, partial -
Ornithorhynchus anatinus
Length = 258
Score = 27.9 bits (59), Expect(2) = 3.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 119 RAGPAHTRARPTSGP 75
R GPAH RA PT GP
Sbjct: 34 RPGPAHRRAPPTPGP 48
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 95 ARPTSGPRLARRLNTPSSWTS-LRARP 18
ARP SGP A R T + W S + ARP
Sbjct: 66 ARPGSGPSPAIRRVTRAGWASAVGARP 92
>UniRef50_A1K2I4 Cluster: Putative uncharacterized protein; n=2;
Azoarcus|Rep: Putative uncharacterized protein -
Azoarcus sp. (strain BH72)
Length = 447
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 17 EAERGATSTSLEYLIAARAAGRRSVVLECVRGRRV 121
+ E G S + +AA AA R+SVV+EC R RR+
Sbjct: 363 DGELGGASNDILRKLAAHAAERKSVVVECSRLRRI 397
>UniRef50_Q2GQQ5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 629
Score = 33.1 bits (72), Expect = 4.3
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +1
Query: 286 HGASFXKKYGKSVNTKETLEDKKDD--ND---LWEAQAAFLGPNLWDKTLPYDPDLKYVD 450
+GA K K N KE DK+DD +D LWE QAA + + P P+++
Sbjct: 472 NGAPATKPARKKRNFKEDEYDKEDDFVDDSELLWEEQAAASKDGFFVYSGPLIPEVEKPA 531
Query: 451 LDEFLSENGMPGEGLGSTHLGGSAFGPALG 540
E G G G GS GG+ G G
Sbjct: 532 ASEERPRRGRGGRGRGSR--GGAVRGEGSG 559
>UniRef50_A5WF65 Cluster: Putative uncharacterized protein; n=1;
Psychrobacter sp. PRwf-1|Rep: Putative uncharacterized
protein - Psychrobacter sp. PRwf-1
Length = 2329
Score = 32.7 bits (71), Expect = 5.7
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 235 GRHDDDYPLINGNDFLSHGASFXKKYGKSVNTKETLEDKKDDNDLWEAQA-AFLGPNLWD 411
G +D NGND ++ GA YGK+ N +T+ +DD+DL A+ L D
Sbjct: 2121 GAQNDTITGGNGNDVINAGAGDDVIYGKAGN--DTINGGEDDDDLKGAEGNDILNGGAGD 2178
Query: 412 KTLPYDPDLKYVDLDEFLSENGMPGEGLGSTHLGGSA 522
TL Y LD E+G+ G+ T + SA
Sbjct: 2179 DTLRGGSGDDY--LDGGAGEDGLYGDTDNDTLVFDSA 2213
>UniRef50_A4FEI9 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 188
Score = 32.7 bits (71), Expect = 5.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 116 AGPAHTRARPTSGPRLARRLNTP--SSWTSLRARPRWRC 6
AGP+ T A P+ GPRL ++ S + + AR RWRC
Sbjct: 61 AGPSATPASPSPGPRLPPGTSSSRRSPGSPVSARRRWRC 99
>UniRef50_UPI0000D664F5 Cluster: PREDICTED: hypothetical protein
LOC66300; n=2; Euarchontoglires|Rep: PREDICTED:
hypothetical protein LOC66300 - Mus musculus
Length = 130
Score = 32.3 bits (70), Expect = 7.5
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -2
Query: 539 PSAGPNAEPPRCVL-----PRPSPGMPFSDRNSSR 450
P A P A P C+L PRP PG+P S R+S R
Sbjct: 81 PPAPPPAAPASCLLGASGGPRPQPGLPRSRRHSRR 115
>UniRef50_UPI0000EBED90 Cluster: PREDICTED: similar to OSBP-related
protein 1; ORP1, partial; n=1; Bos taurus|Rep:
PREDICTED: similar to OSBP-related protein 1; ORP1,
partial - Bos taurus
Length = 310
Score = 31.9 bits (69), Expect = 9.9
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 532 PARTRSRPGACCPGPRXA-CRSXTGTHLGPRT*DRGRRAGS 413
PART PGA PGPR + C + G GPR D R G+
Sbjct: 225 PARTSGGPGA-SPGPRLSPCSTSPGAGGGPREGDLERPCGA 264
>UniRef50_UPI0000D9CB1F Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 235
Score = 31.9 bits (69), Expect = 9.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 538 PAPARTRSRPGACCPGPRXACRSXTGTHLGPRT*DRGRRAGSCP 407
P+P RS P P P+ CRS + T G+ G CP
Sbjct: 151 PSPGSARSLPAPHRPSPQPCCRSSPAPGIRETTARVGKAQGRCP 194
>UniRef50_Q4THE9 Cluster: Chromosome undetermined SCAF2988, whole
genome shotgun sequence; n=6; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2988,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 205
Score = 31.9 bits (69), Expect = 9.9
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 212 SVREGDDLSLSLIIITYNTGLRLDTRTLSGRRA-GPAHTRARPTSGPRLARRLNTPSSW- 39
SV EGDD L L + R+D R R A R+R + R RR P+S
Sbjct: 89 SVEEGDDQDLYLCLHGCPANQRIDFRNFRARAAEAQGSGRSRVAAPRRRCRRTALPTSQP 148
Query: 38 -TSLRARPRWR 9
S R+ RWR
Sbjct: 149 EPSARSGCRWR 159
>UniRef50_Q75IT5 Cluster: Putative uncharacterized protein
OSJNBb0111K12.6; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0111K12.6 - Oryza sativa
subsp. japonica (Rice)
Length = 535
Score = 31.9 bits (69), Expect = 9.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 161 NTGLRLDTRTLSGRRAGPAHTRA-RPTSGPRLARRLNTPSSWTSLRARPRWRC 6
+T +D + GP T A R +S PR+ RR + W + WRC
Sbjct: 100 DTKSEMDGMEVDSPFLGPTRTGADRASSAPRMVRRRQVTAEWRKIVGPIMWRC 152
>UniRef50_Q8I5S9 Cluster: Putative uncharacterized protein; n=9;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1232
Score = 31.9 bits (69), Expect = 9.9
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 286 HGASFXKKYGKSVNTKETLEDKKDDNDLW-EAQAAFLGPNLWDKTLPYDPDLKYVDLDEF 462
+G+ + K + TKE L K NDL+ + + F+ NL +K P++ L +D+D +
Sbjct: 899 NGSVYQWNIEKELKTKEILYLKNKKNDLYQDLSSVFVNKNLVNK--PFNSSLTCIDIDYY 956
Query: 463 L 465
+
Sbjct: 957 M 957
>UniRef50_A2DS14 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 865
Score = 31.9 bits (69), Expect = 9.9
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +1
Query: 220 LKTYIGRHDDDYPLINGNDFLSHGASFXKK---YGKSVNTKETLEDKKDDNDLWEAQAAF 390
L IG+H+D +I D +S G + KK Y S T + +E K ND+
Sbjct: 111 LMEQIGKHNDALEVIKKLDEISPGKAKIKKFNVYMASGQTDKAVELKDSMNDISGEDKYK 170
Query: 391 LGPNLWDKTLPYDPDLKYVDLDE 459
L +W KT K +DL++
Sbjct: 171 LDLEIWKKTRDDQILYKILDLED 193
>UniRef50_Q5KHS4 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 765
Score = 31.9 bits (69), Expect = 9.9
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 536 SAGPN--AEPPRCVLPRPSPGMPFSDRNSSRSTYLRSGS 426
S+GP PP LP P P SD +SS S RSGS
Sbjct: 74 SSGPTELGTPPNVPLPPPPIATPLSDSSSSTSPIKRSGS 112
>UniRef50_Q09813 Cluster: Putative transcription initiation factor
TFIID 111 kDa subunit; n=1; Schizosaccharomyces
pombe|Rep: Putative transcription initiation factor
TFIID 111 kDa subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 979
Score = 31.9 bits (69), Expect = 9.9
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 187 DRSSPSLTDTPL---KTYIGRHDDDYPLINGNDFLSHGASFXKKYGKSVNTKETLEDKKD 357
D ++P + ++P ++ + D P DF+ S K++G ++N + +ED D
Sbjct: 43 DTNNPGMNESPKILDSSFENSNPQDGPNYEDFDFMG---SIHKEFGNNINEMDDMEDVSD 99
Query: 358 DNDLWEAQA 384
DN E QA
Sbjct: 100 DNLPEEEQA 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,703,996
Number of Sequences: 1657284
Number of extensions: 10190413
Number of successful extensions: 32343
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32298
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -