Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4k04
(546 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68985-1|CAA48777.1| 295|Homo sapiens hepatic leukemia factor p... 65 1e-10
M95585-1|AAA52675.1| 295|Homo sapiens hepatic leukemia factor p... 65 1e-10
CR541672-1|CAG46473.1| 295|Homo sapiens HLF protein. 65 1e-10
BC036093-1|AAH36093.1| 295|Homo sapiens hepatic leukemia factor... 65 1e-10
U44059-1|AAB06497.1| 303|Homo sapiens thyrotroph embryonic fact... 54 4e-07
U06935-1|AAA81373.1| 261|Homo sapiens thyrotroph embryonic fact... 54 4e-07
CR541827-1|CAG46626.1| 303|Homo sapiens TEF protein. 54 4e-07
CR456592-1|CAG30478.1| 303|Homo sapiens TEF protein. 54 4e-07
BC042476-1|AAH42476.1| 303|Homo sapiens thyrotrophic embryonic ... 54 4e-07
BC039258-1|AAH39258.1| 303|Homo sapiens thyrotrophic embryonic ... 54 4e-07
AL035659-2|CAI23516.1| 303|Homo sapiens thyrotrophic embryonic ... 54 4e-07
U79283-1|AAB50219.1| 325|Homo sapiens albumin D-box binding pro... 43 6e-04
U48213-1|AAB18668.1| 325|Homo sapiens D-site binding protein pr... 43 6e-04
U06936-1|AAA81374.1| 325|Homo sapiens albumin D-box binding pro... 43 6e-04
EF015902-1|ABM64213.1| 325|Homo sapiens albumin D-box protein. 43 6e-04
BT006836-1|AAP35482.1| 325|Homo sapiens D site of albumin promo... 43 6e-04
BC011965-1|AAH11965.1| 325|Homo sapiens D site of albumin promo... 43 6e-04
AB208807-1|BAD92044.1| 248|Homo sapiens D site of albumin promo... 43 6e-04
X78669-1|CAA55343.1| 317|Homo sapiens EF-hand protein protein. 34 0.28
BT009790-1|AAP88792.1| 317|Homo sapiens reticulocalbin 2, EF-ha... 34 0.28
BC004892-1|AAH04892.1| 317|Homo sapiens reticulocalbin 2, EF-ha... 34 0.28
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 31 2.6
BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein... 30 6.1
BC025239-1|AAH25239.1| 237|Homo sapiens LRP11 protein protein. 30 6.1
AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein... 30 6.1
AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein... 30 6.1
AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein... 30 6.1
AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein... 30 6.1
D83780-1|BAA12109.2| 1164|Homo sapiens KIAA0196 protein. 29 8.0
BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein LO... 29 8.0
BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein LO... 29 8.0
BC106015-1|AAI06016.1| 1159|Homo sapiens KIAA0196 protein. 29 8.0
BC051803-1|AAH51803.1| 503|Homo sapiens LEM domain containing 2... 29 8.0
BC026951-1|AAH26951.1| 1159|Homo sapiens KIAA0196 protein. 29 8.0
AL158049-3|CAI21529.1| 283|Homo sapiens LEM domain containing 2... 29 8.0
AL158049-2|CAI21527.2| 503|Homo sapiens LEM domain containing 2... 29 8.0
AK223628-1|BAD97348.1| 1164|Homo sapiens Protein KIAA0196 varian... 29 8.0
AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens ... 29 8.0
AK097753-1|BAC05161.1| 334|Homo sapiens protein ( Homo sapiens ... 29 8.0
AK074959-1|BAC11316.1| 503|Homo sapiens protein ( Homo sapiens ... 29 8.0
>X68985-1|CAA48777.1| 295|Homo sapiens hepatic leukemia factor
protein.
Length = 295
Score = 65.3 bits (152), Expect = 1e-10
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +1
Query: 310 YGKSVNTKETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGM 480
+ K + ++ L+D + N Q+AFLGP LWDKTLPYD D L+Y+DL+EFLSENG+
Sbjct: 40 FSKDKDKEKKLDD--ESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGI 97
Query: 481 P 483
P
Sbjct: 98 P 98
>M95585-1|AAA52675.1| 295|Homo sapiens hepatic leukemia factor
protein.
Length = 295
Score = 65.3 bits (152), Expect = 1e-10
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +1
Query: 310 YGKSVNTKETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGM 480
+ K + ++ L+D + N Q+AFLGP LWDKTLPYD D L+Y+DL+EFLSENG+
Sbjct: 40 FSKDKDKEKKLDD--ESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGI 97
Query: 481 P 483
P
Sbjct: 98 P 98
>CR541672-1|CAG46473.1| 295|Homo sapiens HLF protein.
Length = 295
Score = 65.3 bits (152), Expect = 1e-10
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +1
Query: 310 YGKSVNTKETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGM 480
+ K + ++ L+D + N Q+AFLGP LWDKTLPYD D L+Y+DL+EFLSENG+
Sbjct: 40 FSKDKDKEKKLDD--ESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGI 97
Query: 481 P 483
P
Sbjct: 98 P 98
>BC036093-1|AAH36093.1| 295|Homo sapiens hepatic leukemia factor
protein.
Length = 295
Score = 65.3 bits (152), Expect = 1e-10
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +1
Query: 310 YGKSVNTKETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGM 480
+ K + ++ L+D + N Q+AFLGP LWDKTLPYD D L+Y+DL+EFLSENG+
Sbjct: 40 FSKDKDKEKKLDD--ESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGI 97
Query: 481 P 483
P
Sbjct: 98 P 98
>U44059-1|AAB06497.1| 303|Homo sapiens thyrotroph embryonic factor
protein.
Length = 303
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>U06935-1|AAA81373.1| 261|Homo sapiens thyrotroph embryonic factor
protein.
Length = 261
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 16 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 72
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 73 THLAHNLLLPVAEL 86
>CR541827-1|CAG46626.1| 303|Homo sapiens TEF protein.
Length = 303
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>CR456592-1|CAG30478.1| 303|Homo sapiens TEF protein.
Length = 303
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>BC042476-1|AAH42476.1| 303|Homo sapiens thyrotrophic embryonic
factor protein.
Length = 303
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>BC039258-1|AAH39258.1| 303|Homo sapiens thyrotrophic embryonic
factor protein.
Length = 303
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>AL035659-2|CAI23516.1| 303|Homo sapiens thyrotrophic embryonic
factor protein.
Length = 303
Score = 53.6 bits (123), Expect = 4e-07
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 KETLEDKKDDNDLWEAQAAFLGPNLWDKTLPYDPD---LKYVDLDEFLSENGMPGEGLGS 501
KE LE+ + A +A L P +WDKT+PYD + L+Y+DLDEFL ENG+P
Sbjct: 58 KEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPA---SP 114
Query: 502 THLGGSAFGPALGL 543
THL + P L
Sbjct: 115 THLAHNLLLPVAEL 128
>U79283-1|AAB50219.1| 325|Homo sapiens albumin D-box binding
protein protein.
Length = 325
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>U48213-1|AAB18668.1| 325|Homo sapiens D-site binding protein
protein.
Length = 325
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>U06936-1|AAA81374.1| 325|Homo sapiens albumin D-box binding
protein protein.
Length = 325
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>EF015902-1|ABM64213.1| 325|Homo sapiens albumin D-box protein.
Length = 325
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>BT006836-1|AAP35482.1| 325|Homo sapiens D site of albumin promoter
(albumin D-box) binding protein protein.
Length = 325
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>BC011965-1|AAH11965.1| 325|Homo sapiens D site of albumin promoter
(albumin D-box) binding protein protein.
Length = 325
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 100 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 129
>AB208807-1|BAD92044.1| 248|Homo sapiens D site of albumin promoter
(albumin D-box) binding protein variant protein.
Length = 248
Score = 43.2 bits (97), Expect = 6e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 391 LGPNLWDKTLPYDPDLKYVDLDEFLSENGMP 483
L P LW++TLP+ D++YVDLD FL E+G+P
Sbjct: 110 LAPLLWERTLPFG-DVEYVDLDAFLLEHGLP 139
>X78669-1|CAA55343.1| 317|Homo sapiens EF-hand protein protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/90 (23%), Positives = 39/90 (43%)
Frame = +1
Query: 223 KTYIGRHDDDYPLINGNDFLSHGASFXKKYGKSVNTKETLEDKKDDNDLWEAQAAFLGPN 402
K + + D P ++ +F++ Y +E LE+ + D + + FLG
Sbjct: 156 KRFEKANQDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGDY 215
Query: 403 LWDKTLPYDPDLKYVDLDEFLSENGMPGEG 492
WD T DP+ V+ D F+++ +G
Sbjct: 216 RWDPTANEDPEWILVEKDRFVNDYDKDNDG 245
>BT009790-1|AAP88792.1| 317|Homo sapiens reticulocalbin 2, EF-hand
calcium binding domain protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/90 (23%), Positives = 39/90 (43%)
Frame = +1
Query: 223 KTYIGRHDDDYPLINGNDFLSHGASFXKKYGKSVNTKETLEDKKDDNDLWEAQAAFLGPN 402
K + + D P ++ +F++ Y +E LE+ + D + + FLG
Sbjct: 156 KRFEKANQDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGDY 215
Query: 403 LWDKTLPYDPDLKYVDLDEFLSENGMPGEG 492
WD T DP+ V+ D F+++ +G
Sbjct: 216 RWDPTANEDPEWILVEKDRFVNDYDKDNDG 245
>BC004892-1|AAH04892.1| 317|Homo sapiens reticulocalbin 2, EF-hand
calcium binding domain protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.28
Identities = 21/90 (23%), Positives = 39/90 (43%)
Frame = +1
Query: 223 KTYIGRHDDDYPLINGNDFLSHGASFXKKYGKSVNTKETLEDKKDDNDLWEAQAAFLGPN 402
K + + D P ++ +F++ Y +E LE+ + D + + FLG
Sbjct: 156 KRFEKANQDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGDY 215
Query: 403 LWDKTLPYDPDLKYVDLDEFLSENGMPGEG 492
WD T DP+ V+ D F+++ +G
Sbjct: 216 RWDPTANEDPEWILVEKDRFVNDYDKDNDG 245
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -2
Query: 170 ITYNTGLRLDTRTL----SGRRAGPAHTRARPTSGPRLARRLNTPSSWTSLRARPRWRC 6
I Y+ R RT S RR PA R G R+ + WTSLR RW C
Sbjct: 615 INYSASTRASARTYAPACSARRGAPARRR-----GARVRNATSRSRWWTSLREARRWWC 668
>BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 538 PAPARTRSRPGACCPGPRXACRSXTGTHLGPR 443
P P T S P AC + ACRS HLG R
Sbjct: 248 PGPGAT-SAPAACATASQFACRSGECVHLGWR 278
>BC025239-1|AAH25239.1| 237|Homo sapiens LRP11 protein protein.
Length = 237
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 167 TYNTGLRLDTRTLSGRRAGPAHTRARPTSGPRLARRLNTPSSWTSLRAR 21
+Y+ D L+ RA P + R T GP LAR L T S+ L A+
Sbjct: 183 SYSLSRAPDGAALATARASPRQGK-RATEGPALARALETRSALAKLEAK 230
>AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 538 PAPARTRSRPGACCPGPRXACRSXTGTHLGPR 443
P P T S P AC + ACRS HLG R
Sbjct: 248 PGPGAT-SAPAACATASQFACRSGECVHLGWR 278
>AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 538 PAPARTRSRPGACCPGPRXACRSXTGTHLGPR 443
P P T S P AC + ACRS HLG R
Sbjct: 248 PGPGAT-SAPAACATASQFACRSGECVHLGWR 278
>AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 538 PAPARTRSRPGACCPGPRXACRSXTGTHLGPR 443
P P T S P AC + ACRS HLG R
Sbjct: 248 PGPGAT-SAPAACATASQFACRSGECVHLGWR 278
>AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 538 PAPARTRSRPGACCPGPRXACRSXTGTHLGPR 443
P P T S P AC + ACRS HLG R
Sbjct: 248 PGPGAT-SAPAACATASQFACRSGECVHLGWR 278
>D83780-1|BAA12109.2| 1164|Homo sapiens KIAA0196 protein.
Length = 1164
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 388 FLGPNLWDKTLPYDPDLKYVDLDEFLSENGM 480
F GP LW+ L P+L+ DLDE EN +
Sbjct: 66 FKGPELWESKLDAKPELQ--DLDEEFRENNI 94
>BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 122 RRAGPAHTRARPTSGPRLARRLNTPSSWTS 33
RRAG A P GP+ AR PS W+S
Sbjct: 127 RRAGGRVRGASPPQGPQTARGFPLPSRWSS 156
>BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 122 RRAGPAHTRARPTSGPRLARRLNTPSSWTS 33
RRAG A P GP+ AR PS W+S
Sbjct: 127 RRAGGRVRGASPPQGPQTARGFPLPSRWSS 156
>BC106015-1|AAI06016.1| 1159|Homo sapiens KIAA0196 protein.
Length = 1159
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 388 FLGPNLWDKTLPYDPDLKYVDLDEFLSENGM 480
F GP LW+ L P+L+ DLDE EN +
Sbjct: 61 FKGPELWESKLDAKPELQ--DLDEEFRENNI 89
>BC051803-1|AAH51803.1| 503|Homo sapiens LEM domain containing 2
protein.
Length = 503
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 131 LSGRRAGPAHT-RARPTSGPRLARRLNTPSSWTSL 30
L RAGPA RARP G RL R L+ W SL
Sbjct: 185 LRATRAGPAGAARARPEVGRRLERWLSRLLLWASL 219
>BC026951-1|AAH26951.1| 1159|Homo sapiens KIAA0196 protein.
Length = 1159
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 388 FLGPNLWDKTLPYDPDLKYVDLDEFLSENGM 480
F GP LW+ L P+L+ DLDE EN +
Sbjct: 61 FKGPELWESKLDAKPELQ--DLDEEFRENNI 89
>AL158049-3|CAI21529.1| 283|Homo sapiens LEM domain containing 2
protein.
Length = 283
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 131 LSGRRAGPAHT-RARPTSGPRLARRLNTPSSWTSL 30
L RAGPA RARP G RL R L+ W SL
Sbjct: 88 LRATRAGPAGAARARPEVGRRLERWLSRLLLWASL 122
>AL158049-2|CAI21527.2| 503|Homo sapiens LEM domain containing 2
protein.
Length = 503
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 131 LSGRRAGPAHT-RARPTSGPRLARRLNTPSSWTSL 30
L RAGPA RARP G RL R L+ W SL
Sbjct: 185 LRATRAGPAGAARARPEVGRRLERWLSRLLLWASL 219
>AK223628-1|BAD97348.1| 1164|Homo sapiens Protein KIAA0196 variant
protein.
Length = 1164
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 388 FLGPNLWDKTLPYDPDLKYVDLDEFLSENGM 480
F GP LW+ L P+L+ DLDE EN +
Sbjct: 66 FKGPELWESKLDAKPELQ--DLDEEFRENNI 94
>AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ41676 fis, clone HCASM2002502. ).
Length = 276
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 122 RRAGPAHTRARPTSGPRLARRLNTPSSWTS 33
RRAG A P GP+ AR PS W+S
Sbjct: 127 RRAGGRVRGASPPQGPQTARGFPLPSRWSS 156
>AK097753-1|BAC05161.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ40434 fis, clone TESTI2039353, moderately
similar to MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN
PRECURSOR. ).
Length = 334
Score = 29.5 bits (63), Expect = 8.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 532 PARTRSRPGACCPGPRXACRSXTGTH 455
PA + +RPG CC CR+ TH
Sbjct: 31 PAWSTARPGTCCCAAWAGCRAAADTH 56
>AK074959-1|BAC11316.1| 503|Homo sapiens protein ( Homo sapiens
cDNA FLJ90478 fis, clone NT2RP3002790. ).
Length = 503
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 131 LSGRRAGPAHT-RARPTSGPRLARRLNTPSSWTSL 30
L RAGPA RARP G RL R L+ W SL
Sbjct: 185 LRATRAGPAGAARARPEVGRRLERWLSRLLLWASL 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,090,121
Number of Sequences: 237096
Number of extensions: 1555745
Number of successful extensions: 4242
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4220
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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