Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4j24
(627 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 55 1e-06
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 50 6e-05
UniRef50_UPI0000E4A09E Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 46 0.001
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 44 0.002
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 44 0.004
UniRef50_Q1DGU8 Cluster: Catrin, putative; n=2; Culicidae|Rep: C... 35 1.4
UniRef50_Q2QNM2 Cluster: Expressed protein; n=4; Magnoliophyta|R... 34 2.4
UniRef50_A7P208 Cluster: Chromosome chr19 scaffold_4, whole geno... 34 3.2
UniRef50_Q7NB93 Cluster: UPF0078 membrane protein MYCGA3860; n=1... 33 5.6
UniRef50_Q64V15 Cluster: Putative TonB-dependent outer membrane ... 33 7.4
UniRef50_Q64R11 Cluster: Sensor protein; n=2; Bacteroides fragil... 33 7.4
UniRef50_Q868S9 Cluster: Gag-like protein; n=1; Anopheles gambia... 32 9.8
UniRef50_Q22VV2 Cluster: Ubiquitin transferase, HECT domain fami... 32 9.8
UniRef50_A0CZQ5 Cluster: Chromosome undetermined scaffold_32, wh... 32 9.8
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +2
Query: 140 MSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQL 262
M+N N+NGTGLEQQ+AGLDL + KS+ +YIPPHLR ++
Sbjct: 1 MNNYANENGTGLEQQVAGLDLNER--KSSTKYIPPHLRGEI 39
>UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 625
Score = 49.6 bits (113), Expect = 6e-05
Identities = 29/63 (46%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 140 MSNVTNQNGTGLEQQLAGLDLQP--------QAPKSTGRYIPPHLRRQLQATSDQGEESK 295
MSN NQNGTGLEQQ AGLDLQ S+ RY+PP LR G E+
Sbjct: 1 MSNAINQNGTGLEQQFAGLDLQQSQCVQDSGNLKSSSARYVPPQLRSGRGGGGGGGPEND 60
Query: 296 RSS 304
S
Sbjct: 61 NQS 63
>UniRef50_UPI0000E4A09E Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 146
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2
Query: 140 MSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLR 253
MSN TNQNG L+QQ A +DL P A K Y+PPHLR
Sbjct: 1 MSNGTNQNGPSLDQQFAAMDLMPGAKK----YVPPHLR 34
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 16/62 (25%)
Frame = +2
Query: 140 MSNVTNQNGTGLEQQLAGLDLQ-------------PQA--PK-STGRYIPPHLRRQLQAT 271
MSN NQNGTGLEQQ AGLDLQ P++ PK GRY+PP LR +
Sbjct: 1 MSNAINQNGTGLEQQFAGLDLQQKQQQLGGGGGSNPESGNPKHPAGRYVPPQLRECADSG 60
Query: 272 SD 277
D
Sbjct: 61 GD 62
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 14/52 (26%)
Frame = +2
Query: 140 MSNVTNQNGTGLEQQLAGLDLQ--------PQAPKST------GRYIPPHLR 253
MSN NQNGTGLEQQ+AGLDL P K++ G Y+PPHLR
Sbjct: 1 MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGVYVPPHLR 52
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 140 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 259
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>UniRef50_Q1DGU8 Cluster: Catrin, putative; n=2; Culicidae|Rep:
Catrin, putative - Aedes aegypti (Yellowfever mosquito)
Length = 256
Score = 35.1 bits (77), Expect = 1.4
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 98 LEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSD 277
L ++ ++N +N+ +++ N TG Q LD +P PKS G+ P RQ TSD
Sbjct: 13 LNKAPRRNTT-ATNLDDISF-NDTGQTQDQ--LDNRPLLPKSLGQSTPDRKDRQKNGTSD 68
Query: 278 QGEESKR 298
GE+S +
Sbjct: 69 GGEDSPK 75
>UniRef50_Q2QNM2 Cluster: Expressed protein; n=4; Magnoliophyta|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 191
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 182 QLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGEESKRSSLDTRPS 322
+L+G+D+ P P ++ IP H R+ +D GE+SK +PS
Sbjct: 111 RLSGIDMMPPPPSTS---IPSHQERERNMAADGGEKSKEIDTPEKPS 154
>UniRef50_A7P208 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 476
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 212 PGAASPDQQAAALDLFHFGW*HYSYYYQAVRF 117
P A +PD+ A LDL H HYS YY+A+ +
Sbjct: 270 PKATAPDRDRALLDLVHKVRTHYSQYYRAMSY 301
>UniRef50_Q7NB93 Cluster: UPF0078 membrane protein MYCGA3860; n=1;
Mycoplasma gallisepticum|Rep: UPF0078 membrane protein
MYCGA3860 - Mycoplasma gallisepticum
Length = 244
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 592 WFIILLTSHVARPASVPFA-FTIIPFLGFIPTLWWFAILRSTVST 461
W I L++ +V+ + V F F +P++ ++ LWWF++ + T T
Sbjct: 155 WTITLISKYVSLASIVCFIIFLFLPYIPWLDYLWWFSLDKITFLT 199
>UniRef50_Q64V15 Cluster: Putative TonB-dependent outer membrane
protein; n=2; Bacteroides fragilis|Rep: Putative
TonB-dependent outer membrane protein - Bacteroides
fragilis
Length = 689
Score = 32.7 bits (71), Expect = 7.4
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 165 PFWLVTLLILLPSGTFFWELCSKNI*NTVY 76
P+ LV L I + G F WE+ SKN+ NT Y
Sbjct: 632 PYALVNLRISINKGCFTWEVWSKNLTNTDY 661
>UniRef50_Q64R11 Cluster: Sensor protein; n=2; Bacteroides
fragilis|Rep: Sensor protein - Bacteroides fragilis
Length = 756
Score = 32.7 bits (71), Expect = 7.4
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -3
Query: 553 ASVPFAFTII--PFLGFIPTLWWFAILRSTVSTAVPALVS 440
A +P +TII PF P +WWFA+L S TA+ +L+S
Sbjct: 339 ADIPHEYTIINIPFKTRHPIVWWFALLGSI--TAIVSLLS 376
>UniRef50_Q868S9 Cluster: Gag-like protein; n=1; Anopheles
gambiae|Rep: Gag-like protein - Anopheles gambiae
(African malaria mosquito)
Length = 724
Score = 32.3 bits (70), Expect = 9.8
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 104 QSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQG 283
Q Q+ P + V + ++QL Q Q + RY+PP LR+Q Q Q
Sbjct: 408 QQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQ 467
Query: 284 EESKRSSLDTRPSE 325
++ +R RP +
Sbjct: 468 QQQQRPQ-QQRPQQ 480
>UniRef50_Q22VV2 Cluster: Ubiquitin transferase, HECT domain family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ubiquitin transferase, HECT domain family protein -
Tetrahymena thermophila SB210
Length = 4110
Score = 32.3 bits (70), Expect = 9.8
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 101 EQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTG----RYIPPHLRRQLQA 268
+Q +Q+N G+N +N +QQ QPQA + +PPHLR ++
Sbjct: 3027 QQQAQQNNQQGNNNNNQQANQQAQQQQQQQAQQQQPQAEEMDAATFLASLPPHLRDEILL 3086
Query: 269 TSDQ 280
TS Q
Sbjct: 3087 TSTQ 3090
>UniRef50_A0CZQ5 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 537
Score = 32.3 bits (70), Expect = 9.8
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 107 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQ 211
+SQ N+P SNV+NQN + QQL GL L+ Q
Sbjct: 99 ASQTNIP--QQQSNVSNQNQIQILQQLKGLQLENQ 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,454,088
Number of Sequences: 1657284
Number of extensions: 10442952
Number of successful extensions: 33466
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 32269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33447
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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