Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4j24
(627 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.60
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 1.8
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 1.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 7.4
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 21 9.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.8
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 21 9.8
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.8
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 9.8
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.8
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.0 bits (52), Expect = 0.60
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 101 EQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQ 280
+Q+ Q+ + L S + N+ +G + AGL K+TG + + TS Q
Sbjct: 1234 QQTQQQPIILPSQLLNIKTLHGLKVIPTPAGL-------KTTGAAVYARVIAPTTITSSQ 1286
Query: 281 GEESKRSSLDTRPS 322
+++ ++ T+PS
Sbjct: 1287 SPGNQQQTIQTQPS 1300
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 625 RLFPAVIPWCRWFIILLTSHVARPASVP 542
R F A+I W +FI++ T + VP
Sbjct: 402 RHFAAIIEWLSFFIVIFTYIIILITLVP 429
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 81 VYNEFCTNTNSQNHKKDSISH 19
V+ + + N + KKDSISH
Sbjct: 441 VHTSYKSGLNLEQEKKDSISH 461
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -1
Query: 354 PPNDERLSRDS---LGRVSKLERLDSSP*SE 271
PPNDE + DS G +++ LDS+ S+
Sbjct: 195 PPNDEGIETDSDRRKGSIARCWSLDSTAASD 225
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = -1
Query: 129 SGTFFWELCSKNI*NTVYNEFCTNTNSQNHKKDS 28
+G E C +N N+ NTN+ N+ ++
Sbjct: 211 AGAVVLETCQRNSNNSTITAGNANTNASNNNNNN 244
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 204 SPRLLRVLVATYPRICVGSCRQPLIKGK 287
SPR R+LVAT + C PL+ K
Sbjct: 178 SPRRARLLVATVWILSFVICFPPLVGWK 205
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 530 DHSISRIHSNALVVRHSEIHCLDRGPC 450
D I RI N ++ + LD GPC
Sbjct: 27 DMDIDRILQNGRILTNYIKCMLDEGPC 53
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 102 SKNI*NTVYNEFCTNTNSQNHKK 34
S N + YN + N N N+KK
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKK 108
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 203 QPQAPKSTGRYIPPHLRRQLQATSDQGEE 289
+ +A K +YIPP L ++ + G E
Sbjct: 143 EEEAQKPKEQYIPPELPNDEKSLFENGVE 171
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 530 DHSISRIHSNALVVRHSEIHCLDRGPC 450
D I RI N ++ + LD GPC
Sbjct: 27 DMDIDRILQNGRILTNYIKCMLDEGPC 53
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 219 LGAWGCKSRPASCCSRP 169
L + K PASCC+ P
Sbjct: 151 LSDYNDKPIPASCCNSP 167
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 78 YNEFCTNTNSQNHKKDSISHS 16
Y+ C+N+ SQ SIS +
Sbjct: 17 YSNTCSNSQSQRSSGSSISRN 37
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/28 (21%), Positives = 17/28 (60%)
Frame = -1
Query: 114 WELCSKNI*NTVYNEFCTNTNSQNHKKD 31
+ + N+ + + N C N+++QN+ ++
Sbjct: 567 FRILGANVNDLIMNTRCANSDNQNNNQN 594
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 78 YNEFCTNTNSQNHKKDSISHS 16
Y+ C+N+ SQ SIS +
Sbjct: 17 YSNTCSNSQSQRSSGSSISRN 37
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,795
Number of Sequences: 438
Number of extensions: 3398
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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