Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4j22
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   4.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   5.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 162 ILGRCVHLHRQDPVQQVHHHH 224
           +L    H  +Q   QQ+HHHH
Sbjct: 143 VLHHQAHQQQQQQQQQLHHHH 163


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 174 CVHLHRQDPVQQVHHHHLCLI 236
           C+HL+    V Q + H+LC++
Sbjct: 115 CLHLYLSPDVVQANIHNLCVL 135


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 192 QDPVQQVHHHH 224
           Q P  Q HHHH
Sbjct: 276 QQPTHQTHHHH 286


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 192 QDPVQQVHHHH 224
           Q P  Q HHHH
Sbjct: 276 QQPTHQTHHHH 286


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 192 QDPVQQVHHHH 224
           Q P  Q HHHH
Sbjct: 228 QQPTHQTHHHH 238


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 171 RCVHLHRQDPVQQVHHHHL 227
           R V    Q   QQ HHHHL
Sbjct: 772 RIVPSPNQQQQQQHHHHHL 790


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,074
Number of Sequences: 2352
Number of extensions: 11900
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)