Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4j22
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.0  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 149 IAQKTFCTLFRVYISFNHRLI 87
           ++  TFC +F  ++ FN  LI
Sbjct: 206 VSPMTFCRVFPFHLMFNRDLI 226


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 287 YKNKSEVPPFVSAEIIERSKSEA 355
           YKN    PPF  A +I +S  E+
Sbjct: 498 YKNADVRPPFTYASLIRQSIIES 520


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 149 IAQKTFCTLFRVYISFNHRLI 87
           ++  TFC +F  ++ FN  LI
Sbjct: 206 VSPMTFCRVFPFHLMFNRDLI 226


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 186 HRQDPVQQVHHH 221
           HR  P+ Q HHH
Sbjct: 64  HRDLPIYQSHHH 75


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 283 FCPHKNRFLKFCRSKSMRH 227
           FCP  N+ LK+   K M +
Sbjct: 337 FCPKNNKELKYDDIKEMEY 355


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 192 QDPVQQVHHH 221
           Q P QQ+HHH
Sbjct: 808 QPPHQQLHHH 817


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,393
Number of Sequences: 438
Number of extensions: 3154
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)