Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4j21
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein. 30 7.3
BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, R... 30 7.3
AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein. 30 7.3
AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyros... 30 7.3
Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein. 30 9.6
L38969-1|AAC41762.1| 956|Homo sapiens thrombospondin 3 protein. 30 9.6
L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein. 30 9.6
BC113847-1|AAI13848.1| 956|Homo sapiens thrombospondin 3, precu... 30 9.6
BC113846-1|AAI13847.1| 485|Homo sapiens THBS3 protein protein. 30 9.6
BC018786-1|AAH18786.1| 592|Homo sapiens Similar to thrombospond... 30 9.6
AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or mix... 30 9.6
AL713999-15|CAI95084.1| 956|Homo sapiens thrombospondin 3 protein. 30 9.6
AK223278-1|BAD96998.1| 956|Homo sapiens thrombospondin 3 precur... 30 9.6
AF023268-6|AAC51818.1| 736|Homo sapiens thrombospondin3 protein. 30 9.6
AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or mix... 30 9.6
>BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 29 FDNGYSEFCDKQQPNDYLNYYNNPTPDGAD 118
+D+GY D+Q + Y N Y+ P GAD
Sbjct: 270 YDDGYGTAYDEQSYDSYDNSYSTPAQSGAD 299
>BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 3 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 29 FDNGYSEFCDKQQPNDYLNYYNNPTPDGAD 118
+D+GY D+Q + Y N Y+ P GAD
Sbjct: 271 YDDGYGTAYDEQSYDSYDNSYSTPAQSGAD 300
>AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 29 FDNGYSEFCDKQQPNDYLNYYNNPTPDGAD 118
+D+GY D+Q + Y N Y+ P GAD
Sbjct: 271 YDDGYGTAYDEQSYDSYDNSYSTPAQSGAD 300
>AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyrosine
protein alpha protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 29 FDNGYSEFCDKQQPNDYLNYYNNPTPDGAD 118
+D+GY D+Q + Y N Y+ P GAD
Sbjct: 271 YDDGYGTAYDEQSYDSYDNSYSTPAQSGAD 300
>Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.
Length = 4005
Score = 29.9 bits (64), Expect = 9.6
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +2
Query: 20 RASFDNGYSEFCDKQQPNDYLNYYNNPTPD----GADTVVSDSETAAASNFLASVNSLTD 187
++ DN S+ C P+D +++ TP G S SE L ++
Sbjct: 2866 KSDSDNNNSDDCGNILPSDIMDFVLKNTPSMQALGESPESSSSELLNLGEGLGLDSNREK 2925
Query: 188 DNDIMECL---LKTTDNLGEAVSSAYYS-ESLELPVAEQPSPSSAYNAES 325
D + E L TT+ + +VSS+ + E ELP+ E PS S S
Sbjct: 2926 DMGLFEVFSQQLPTTEPVDSSVSSSISAEEQFELPL-ELPSDLSVLTTRS 2974
>L38969-1|AAC41762.1| 956|Homo sapiens thrombospondin 3 protein.
Length = 956
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 643 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 702
Query: 185 DDND 196
DND
Sbjct: 703 FDND 706
>L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein.
Length = 3969
Score = 29.9 bits (64), Expect = 9.6
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +2
Query: 20 RASFDNGYSEFCDKQQPNDYLNYYNNPTPD----GADTVVSDSETAAASNFLASVNSLTD 187
++ DN S+ C P+D +++ TP G S SE L ++
Sbjct: 2830 KSDSDNNNSDDCGNILPSDIMDFVLKNTPSMQALGESPESSSSELLNLGEGLGLDSNREK 2889
Query: 188 DNDIMECL---LKTTDNLGEAVSSAYYS-ESLELPVAEQPSPSSAYNAES 325
D + E L TT+ + +VSS+ + E ELP+ E PS S S
Sbjct: 2890 DMGLFEVFSQQLPTTEPVDSSVSSSISAEEQFELPL-ELPSDLSVLTTRS 2938
>BC113847-1|AAI13848.1| 956|Homo sapiens thrombospondin 3,
precursor protein.
Length = 956
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 643 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 702
Query: 185 DDND 196
DND
Sbjct: 703 FDND 706
>BC113846-1|AAI13847.1| 485|Homo sapiens THBS3 protein protein.
Length = 485
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 172 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 231
Query: 185 DDND 196
DND
Sbjct: 232 FDND 235
>BC018786-1|AAH18786.1| 592|Homo sapiens Similar to thrombospondin
3 protein.
Length = 592
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 279 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 338
Query: 185 DDND 196
DND
Sbjct: 339 FDND 342
>AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
protein.
Length = 3969
Score = 29.9 bits (64), Expect = 9.6
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +2
Query: 20 RASFDNGYSEFCDKQQPNDYLNYYNNPTPD----GADTVVSDSETAAASNFLASVNSLTD 187
++ DN S+ C P+D +++ TP G S SE L ++
Sbjct: 2830 KSDSDNNNSDDCGNILPSDIMDFVLKNTPSMQALGESPESSSSELLNLGEGLGLDSNREK 2889
Query: 188 DNDIMECL---LKTTDNLGEAVSSAYYS-ESLELPVAEQPSPSSAYNAES 325
D + E L TT+ + +VSS+ + E ELP+ E PS S S
Sbjct: 2890 DMGLFEVFSQQLPTTEPVDSSVSSSISAEEQFELPL-ELPSDLSVLTTRS 2938
>AL713999-15|CAI95084.1| 956|Homo sapiens thrombospondin 3 protein.
Length = 956
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 643 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 702
Query: 185 DDND 196
DND
Sbjct: 703 FDND 706
>AK223278-1|BAD96998.1| 956|Homo sapiens thrombospondin 3 precursor
variant protein.
Length = 956
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 643 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 702
Query: 185 DDND 196
DND
Sbjct: 703 FDND 706
>AF023268-6|AAC51818.1| 736|Homo sapiens thrombospondin3 protein.
Length = 736
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTPSRASFDN-GYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLT 184
P S+ DN G + CD ND + Y P PD V + ++ + N + V
Sbjct: 643 PNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDD 702
Query: 185 DDND 196
DND
Sbjct: 703 FDND 706
>AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
vari protein.
Length = 2880
Score = 29.9 bits (64), Expect = 9.6
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +2
Query: 20 RASFDNGYSEFCDKQQPNDYLNYYNNPTPD----GADTVVSDSETAAASNFLASVNSLTD 187
++ DN S+ C P+D +++ TP G S SE L ++
Sbjct: 1741 KSDSDNNNSDDCGNILPSDIMDFVLKNTPSMQALGESPESSSSELLNLGEGLGLDSNREK 1800
Query: 188 DNDIMECL---LKTTDNLGEAVSSAYYS-ESLELPVAEQPSPSSAYNAES 325
D + E L TT+ + +VSS+ + E ELP+ E PS S S
Sbjct: 1801 DMGLFEVFSQQLPTTEPVDSSVSSSISAEEQFELPL-ELPSDLSVLTTRS 1849
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,600,065
Number of Sequences: 237096
Number of extensions: 2015861
Number of successful extensions: 4417
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4417
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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