Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4j08
(776 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000ECAABD Cluster: Protein FAM100A.; n=3; Gallus ga... 61 3e-08
UniRef50_UPI0000512FED Cluster: PREDICTED: hypothetical protein ... 56 7e-07
UniRef50_Q8TB05-2 Cluster: Isoform 2 of Q8TB05 ; n=5; Eutheria|R... 56 7e-07
UniRef50_Q8TB05 Cluster: Protein FAM100A; n=37; Eumetazoa|Rep: P... 56 7e-07
UniRef50_UPI00015B4186 Cluster: PREDICTED: similar to Family wit... 56 1e-06
UniRef50_UPI00005A1A6F Cluster: PREDICTED: hypothetical protein ... 51 3e-05
UniRef50_UPI00005848C4 Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_Q4S4E7 Cluster: Chromosome 2 SCAF14738, whole genome sh... 46 0.001
UniRef50_UPI0000ECAABC Cluster: UPI0000ECAABC related cluster; n... 40 0.092
UniRef50_A0QXU9 Cluster: Choline dehydrogenase; n=1; Mycobacteri... 37 0.65
UniRef50_Q0V5Z0 Cluster: Predicted protein; n=1; Phaeosphaeria n... 36 0.85
UniRef50_Q47M45 Cluster: ATP-binding region, ATPase-like precurs... 33 6.0
UniRef50_A3DCG3 Cluster: Type 3a, cellulose-binding; n=1; Clostr... 33 6.0
>UniRef50_UPI0000ECAABD Cluster: Protein FAM100A.; n=3; Gallus
gallus|Rep: Protein FAM100A. - Gallus gallus
Length = 127
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +3
Query: 36 HYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVC-MNTA--PPVSPLATH 200
H+ Q + TP NTPATPPNFPDAL FSRL + S N++ V M T+ PP PL H
Sbjct: 17 HHHQMMCTPANTPATPPNFPDALTMFSRLKASESFNSSSPVASMATSPPPPAPPLPQH 74
>UniRef50_UPI0000512FED Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Apis mellifera|Rep: PREDICTED:
hypothetical protein isoform 1 - Apis mellifera
Length = 141
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +3
Query: 3 IPAGANGIAAPHYGQQLMTPCNTPATPPNFPDALAAFSRLS 125
IP A G H+GQ +TPCNTPATPPNFPDAL AFS++S
Sbjct: 48 IPPCAQG-PGTHFGQ--ITPCNTPATPPNFPDALLAFSKMS 85
>UniRef50_Q8TB05-2 Cluster: Isoform 2 of Q8TB05 ; n=5; Eutheria|Rep:
Isoform 2 of Q8TB05 - Homo sapiens (Human)
Length = 212
Score = 56.4 bits (130), Expect = 7e-07
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +3
Query: 12 GANGIAAPHYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 188
GA+ I+ P + Q+ TP NTPATPPNFPDAL FSRL + S ++ G A SP
Sbjct: 85 GAHPIS-PLFPSQMCTPANTPATPPNFPDALTMFSRLKASESFHSGGSGSPMAATATSP 142
>UniRef50_Q8TB05 Cluster: Protein FAM100A; n=37; Eumetazoa|Rep:
Protein FAM100A - Homo sapiens (Human)
Length = 177
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +3
Query: 36 HYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 188
H+ Q + TP NTPATPPNFPDAL FSRL + S ++ G A SP
Sbjct: 57 HHHQMMCTPANTPATPPNFPDALTMFSRLKASESFHSGGSGSPMAATATSP 107
>UniRef50_UPI00015B4186 Cluster: PREDICTED: similar to Family with
sequence similarity 100, member B; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Family with
sequence similarity 100, member B - Nasonia vitripennis
Length = 143
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 27 AAPHYGQQLMTPCNTPATPPNFPDALAAFSRLS 125
A PH+ +L+TPCNTPATPPNFPDAL AFS++S
Sbjct: 51 AHPHF--RLITPCNTPATPPNFPDALLAFSKMS 81
>UniRef50_UPI00005A1A6F Cluster: PREDICTED: hypothetical protein
XP_846654; n=2; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_846654 - Canis familiaris
Length = 207
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 45 QQLMTPCNTPATPPNFPDALAAFSRLSTTG--SPNNAGGVCMNTAPPVS 185
QQ+ TP NTPATPPNFPDALA FS+L + +N+ + +PP +
Sbjct: 101 QQMCTPSNTPATPPNFPDALAMFSKLRASDGLQSSNSPMTAVACSPPAN 149
>UniRef50_UPI00005848C4 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 133
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +3
Query: 42 GQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSPLAT 197
G + P NTPATPPNFPD L +FSR+ T + G M A SP+ T
Sbjct: 61 GHSIHAPANTPATPPNFPDILTSFSRMGATPTDKCLGASPM--AMATSPIQT 110
>UniRef50_Q4S4E7 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14738, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 200
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 51 LMTPCNTPATPPNFPDALAAFSRLSTTGS 137
+ P NTPATPPNFPDAL FSRL + S
Sbjct: 92 MCAPANTPATPPNFPDALTMFSRLKASES 120
>UniRef50_UPI0000ECAABC Cluster: UPI0000ECAABC related cluster; n=1;
Gallus gallus|Rep: UPI0000ECAABC UniRef100 entry -
Gallus gallus
Length = 129
Score = 39.5 bits (88), Expect = 0.092
Identities = 26/54 (48%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 199 CVASGDTGGAVFIQ---TPPALLGLPVVDSRENAANASGKFGGVAGVLHGVINC 47
C SG GG + T LL L REN ASGK GGVAGVL GV C
Sbjct: 50 CWGSGGAGGGGDVAMEATGLLLLKLSEALRRENMVRASGKLGGVAGVLAGVHIC 103
>UniRef50_A0QXU9 Cluster: Choline dehydrogenase; n=1; Mycobacterium
smegmatis str. MC2 155|Rep: Choline dehydrogenase -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 489
Score = 36.7 bits (81), Expect = 0.65
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 18 NGIAAP-HYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSPLA 194
+G+AAP Y P TP T FP +A+ T P + G V + + P P+
Sbjct: 349 SGLAAPDQYACFTGIPFGTPETAERFPLPASAWFLYGTVARPQSRGTVTLTGSHPCDPVQ 408
Query: 195 THXXXXSHQSHV 230
H +H V
Sbjct: 409 VHANSLAHPEDV 420
>UniRef50_Q0V5Z0 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 210
Score = 36.3 bits (80), Expect = 0.85
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 30 APHYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 188
AP YG + + P PP++P A S T+ P ++G + N PP++P
Sbjct: 124 APQYGARALAPAPLHQQPPSYPAPYGAQS--PTSSRPQSSGQLLRNGPPPLAP 174
>UniRef50_Q47M45 Cluster: ATP-binding region, ATPase-like precursor;
n=1; Thermobifida fusca YX|Rep: ATP-binding region,
ATPase-like precursor - Thermobifida fusca (strain YX)
Length = 836
Score = 33.5 bits (73), Expect = 6.0
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Frame = +3
Query: 6 PAGA-NGIAAPHYGQQLMTPCNT--PATPPNFP---DALAAFSRLSTTGS------PNNA 149
P GA + A+ G L TP ++ PA PP P ++ F L+T G+ P +
Sbjct: 685 PTGAPSEEASESDGDMLTTPSSSQAPAQPPRLPRRIPGVSTFPELATEGAARRPTPPAPS 744
Query: 150 GGVCMNTAPPVSPLATHXXXXSHQSHVQINMYPGSANTPTNYTSISCSTAMCSEHMPR 323
G + P AT + Q+N+ P + PT T+ S T + M R
Sbjct: 745 GSSPADAPQRPQPAATEGRPPLPRRIPQVNLVPQLCDDPTEETASSPETGPSTNDMER 802
>UniRef50_A3DCG3 Cluster: Type 3a, cellulose-binding; n=1;
Clostridium thermocellum ATCC 27405|Rep: Type 3a,
cellulose-binding - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 522
Score = 33.5 bits (73), Expect = 6.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 45 QQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 188
Q +MTP NTPA P P A +++ +P A V +NT PV P
Sbjct: 284 QVVMTPANTPAKPTAAPTKAPAAVAVTSAKTPERATTVPVNT--PVKP 329
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,796,407
Number of Sequences: 1657284
Number of extensions: 14187279
Number of successful extensions: 32094
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 30569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32046
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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