Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4j07
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   2.3  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    25   2.3  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    25   2.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.1  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   7.1  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 560 DAVSRHVDKKYKYTYSESGARLPP 631
           D+ S H+++  + T+S +  RLPP
Sbjct: 65  DSGSSHLERTIELTFSPADCRLPP 88


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -2

Query: 666 GSPCFATLF--GAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLL 532
           G  C A L   G +  SLA  SLY   YF  T L T     P  +L+
Sbjct: 230 GDYCVARLRREGHDACSLAARSLYECYYFADTLLPTFERILPLLRLV 276


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -2

Query: 666 GSPCFATLF--GAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLL 532
           G  C A L   G +  SLA  SLY   YF  T L T     P  +L+
Sbjct: 230 GDYCVARLRREGHDACSLAARSLYECYYFADTLLPTFERILPLLRLV 276


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +3

Query: 102 LFKIGQTTNLTRRLVSLNCGRADDDQMRYVLQTEPTVHHTLLEKLMKQELRPYRNSGEV 278
           +FK   TT   R +   +C  ++   +  +L+  PT+     + L++   R     G+V
Sbjct: 735 VFKQDSTTTKCRVVFDGSCKTSNGRSLNDILKVGPTIQQDTTDILLRWRRRAIAVVGDV 793


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 506 VKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARL 625
           VK +AK   +  KYGN  DA+         ++Y     ++
Sbjct: 343 VKSLAKRYGTQYKYGNVIDAIYPASGSSVDWSYGAQDVKI 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,632
Number of Sequences: 2352
Number of extensions: 13199
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)