Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4j07
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA...    31   1.5  
AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p pro...    30   2.7  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    30   2.7  
AY113258-1|AAM29263.1|  477|Drosophila melanogaster AT15039p pro...    29   8.2  
AE014297-248|AAF52030.1|  477|Drosophila melanogaster CG12147-PA...    29   8.2  

>AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA
           protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -3

Query: 635 PRAVVSPPTRCTYICIFYPR-VCLQRLYNFHILNC-WRCP 522
           P  V++      Y+C F  + +CL++ Y++H+ +C  RCP
Sbjct: 163 PYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCP 202


>AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p
           protein.
          Length = 374

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 3   SLLQDAQATVKFNSAPVEGHFYAATTLLYAERNLFKIGQTTNLTRRLVS 149
           S+L  AQ    F+  P  GHF AA TLL  E+   K+ + +   +R +S
Sbjct: 297 SILSTAQKLHMFDDKPKGGHFNAAPTLL--EQQQEKMSERSRCLQRTIS 343


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 3    SLLQDAQATVKFNSAPVEGHFYAATTLLYAERNLFKIGQTTNLTRRLVS 149
            S+L  AQ    F+  P  GHF AA TLL  E+   K+ + +   +R +S
Sbjct: 3069 SILSTAQKLHMFDDKPKGGHFNAAPTLL--EQQQEKMSERSRCLQRTIS 3115


>AY113258-1|AAM29263.1|  477|Drosophila melanogaster AT15039p
           protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 284 AVDLAAVAVRSQLLFHQLFEQRVVHGGLGLQHVPHLVVVGA 162
           A+ L +  V+  LL  +     ++ GGLG+ HV H    GA
Sbjct: 95  AIKLESSTVKHPLLPREARIYGILQGGLGIPHVKHYATEGA 135


>AE014297-248|AAF52030.1|  477|Drosophila melanogaster CG12147-PA
           protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 284 AVDLAAVAVRSQLLFHQLFEQRVVHGGLGLQHVPHLVVVGA 162
           A+ L +  V+  LL  +     ++ GGLG+ HV H    GA
Sbjct: 95  AIKLESSTVKHPLLPREARIYGILQGGLGIPHVKHYATEGA 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,630,982
Number of Sequences: 53049
Number of extensions: 597674
Number of successful extensions: 1746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)