Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4i24
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5P185 Cluster: Putative uncharacterized protein; n=1; ...    33   4.2  
UniRef50_A7SL47 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.6  
UniRef50_A4Z2Y9 Cluster: Putative HlyD family secretion protein;...    32   7.3  
UniRef50_UPI000023D20B Cluster: hypothetical protein FG05526.1; ...    32   9.7  
UniRef50_A0GJ95 Cluster: Putative uncharacterized protein; n=4; ...    32   9.7  
UniRef50_Q6YVV5 Cluster: Putative uncharacterized protein P0696F...    32   9.7  
UniRef50_Q5KFS0 Cluster: Protein CFT1; n=1; Filobasidiella neofo...    32   9.7  

>UniRef50_A5P185 Cluster: Putative uncharacterized protein; n=1;
           Methylobacterium sp. 4-46|Rep: Putative uncharacterized
           protein - Methylobacterium sp. 4-46
          Length = 299

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 171 CCAGQRCREINASRIGSELMLVRSSTRRC 85
           C AG+ CR   AS  G      RSSTRRC
Sbjct: 15  CSAGRVCRRSGASSCGGGARTARSSTRRC 43


>UniRef50_A7SL47 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 196

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +2

Query: 191 IATPPRGTADAXSRTQR--GLASTRALLNGGSRQVVKCSVHCVCATVMC*RKRLKR 352
           IAT  + T  A ++T +  G +S  A + GGS   +   +  +C  V+C RKR  R
Sbjct: 14  IATTHKSTPPATTKTSKNKGASSQTATIAGGSVGGIVALLFVICIVVVCVRKRRSR 69


>UniRef50_A4Z2Y9 Cluster: Putative HlyD family secretion protein;
           n=1; Bradyrhizobium sp. ORS278|Rep: Putative HlyD family
           secretion protein - Bradyrhizobium sp. (strain ORS278)
          Length = 498

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -3

Query: 253 GSQSALCPRXS-VGGAPGRRRYRALITLVLCWSEVSGDQCEPDRQRAHAXAVVDPSVRRV 77
           GS +AL  + + + GAP    Y A +TL   W EV+G + EP R      A +    RRV
Sbjct: 421 GSTAALMTQSANLPGAPPELSYPAKVTLAQDWIEVNG-RHEPIRPGMRVSAEIKTGERRV 479

Query: 76  TVQHSLNTRLEAAQ 35
            +++ L+  ++A +
Sbjct: 480 -IEYLLSPVVQAVK 492


>UniRef50_UPI000023D20B Cluster: hypothetical protein FG05526.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05526.1 - Gibberella zeae PH-1
          Length = 189

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = -3

Query: 205 GRRRY-RALITLVLC---WSEVSGDQCEPDRQRAHAXAVVDPSVRRVTVQHSLNTRLEAA 38
           GRR Y   L+ LV+    W  VSG    PD        +VDP   R++ +HSLNT L   
Sbjct: 132 GRRDYGEPLVMLVITAPPWIPVSG-VAGPD--------IVDPITYRLSPEHSLNTELALT 182

Query: 37  QGTTQ 23
            GT Q
Sbjct: 183 GGTRQ 187


>UniRef50_A0GJ95 Cluster: Putative uncharacterized protein; n=4;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia phytofirmans PsJN
          Length = 168

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -3

Query: 202 RRRYRALITLVLCWSEVSGDQCEPDRQRAHAXAVVDPSV--RRVTVQHSLNTRLEAAQ 35
           R+R+R L+ L++  +E    + E DR+     A+    +   R+T QH+ N   EA+Q
Sbjct: 72  RKRHRTLLELLVDTAEQYQQELESDRELFQVIALDAKGIPRSRITAQHATNLLAEASQ 129


>UniRef50_Q6YVV5 Cluster: Putative uncharacterized protein
           P0696F12.11; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0696F12.11 - Oryza sativa subsp. japonica (Rice)
          Length = 150

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -3

Query: 253 GSQSALCPRXSVGGAPGRRRYRALITLVLCWSEVSGDQCEPDRQRAHAXAVV 98
           GS SA CPR +V G   RR+ R   +   CW      Q  PD +R  A  V+
Sbjct: 67  GSCSASCPRPAVLGMARRRKARPAASARWCWPHT---QPWPDGRRREAVEVL 115


>UniRef50_Q5KFS0 Cluster: Protein CFT1; n=1; Filobasidiella
            neoformans|Rep: Protein CFT1 - Cryptococcus neoformans
            (Filobasidiella neoformans)
          Length = 1431

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 98   DDRTSMSSLPIRLALISRHL*PAQHKGDKGSIATPPRGTADAXSRTQRGLA 250
            D+   M   PI    + +HL    H G   +    PR T DA S ++R LA
Sbjct: 851  DEIIQMVFCPIGKGTVRQHLLALHHSGRLNAYEAQPRFTVDASSHSRRSLA 901


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,934,618
Number of Sequences: 1657284
Number of extensions: 9166417
Number of successful extensions: 23999
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23966
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)