Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4i20
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 32 0.46
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 32 0.46
AF025462-5|AAN72425.1| 129|Caenorhabditis elegans Hypothetical ... 31 0.61
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 31 1.1
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 31 1.1
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 30 1.4
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 30 1.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 1.4
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80027-12|AAC48126.2| 493|Caenorhabditis elegans Hypothetical p... 30 1.9
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 1.9
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 1.9
AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical ... 30 1.9
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 2.5
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 29 2.5
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.3
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 4.3
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 4.3
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 4.3
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 4.3
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 4.3
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 29 4.3
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 4.3
AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical... 28 5.7
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 7.5
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 7.5
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 7.5
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 7.5
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 28 7.5
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 7.5
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 28 7.5
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 27 9.9
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 27 9.9
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 27 9.9
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 27 9.9
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 224 CL*C--GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
C+ C GAPG GA+ +G G G P Q G+ A QP P GRP
Sbjct: 183 CIICPTGAPGPMGAMGPKGPP-GPKGSPGEPPQDGKSGDDGMAGQPGPIGRP 233
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 224 CL*C--GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
C+ C GAPG GA+ +G G G P Q G+ A QP P GRP
Sbjct: 183 CIICPTGAPGPMGAMGPKGPP-GPKGSPGEPPQDGKSGDDGMAGQPGPIGRP 233
>AF025462-5|AAN72425.1| 129|Caenorhabditis elegans Hypothetical
protein K10F12.7 protein.
Length = 129
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +3
Query: 576 LAAPAHRT--GSLQLLDVSSVH-RDGGSSA--PSVVRCHRSALVCVCVS 707
L+ PAH SLQ + VH R GG+ A P+++ CH L C C+S
Sbjct: 70 LSFPAHTNLCVSLQKITTLEVHGRTGGAPACAPTLLSCHFMLLQCFCLS 118
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 236 GAPGREGALQ*RG--AGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
GAPG+ G RG G G P +G P G +A P PAG
Sbjct: 163 GAPGKIGPRGQRGQSGGAGTPGNNGAPGHNGELGPCGQAGPPGPAG 208
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 363 AGGGCTASELSPRVASWCGTPSRIGTPRPAPLYCNAPSRP 244
AGGG S P CG P G PAP+Y AP P
Sbjct: 29 AGGGGCCSSAQPA----CGNPCGGGGAAPAPVYAAAPLAP 64
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -2
Query: 706 LTHTHTSAERWQRTTLGALEPPSRCTLDTSSNCRDPVR-CAGAASICVALGSVAMAHSGL 530
+T+ + W+ T+ A + PS C C D V CA SIC A+G +
Sbjct: 129 ITNEQCRSSVWR--TIIATDCPSACGFCNQGGCVDGVMDCANDLSICGAVGMQEFVNQYC 186
Query: 529 AEDGVRSNATRWNVGNANTC 470
+ R ++T G +C
Sbjct: 187 QKTCQRCSSTTAATGTGGSC 206
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 243 LVEKAHYSKEELG--EVSLCEMVFR--TNWLLVVKARKPYSLLLLDDQQRAFKAEVVFKS 410
L+ + + SKEE V C + W+L + S ++ ++R KAEV+ K
Sbjct: 2302 LIREKYLSKEEFDPENVKQCSLAAEGLCRWVLAIDMYNQISKIVEPKRERLRKAEVLVKQ 2361
Query: 411 PIRALRARKDKVAVVLTSSVQVLA 482
++ L ++ K + +T +Q L+
Sbjct: 2362 HLKQLEVKR-KALLKVTEKLQGLS 2384
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 243 LVEKAHYSKEELG--EVSLCEMVFR--TNWLLVVKARKPYSLLLLDDQQRAFKAEVVFKS 410
L+ + + SKEE V C + W+L + S ++ ++R KAEV+ K
Sbjct: 2302 LIREKYLSKEEFDPENVKQCSLAAEGLCRWVLAIDMYNQISKIVEPKRERLRKAEVLVKQ 2361
Query: 411 PIRALRARKDKVAVVLTSSVQVLA 482
++ L ++ K + +T +Q L+
Sbjct: 2362 HLKQLEVKR-KALLKVTEKLQGLS 2384
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRG---VPMRDG---VPHQLATRGESSEAVQPPPAGRPATCLQS*G 397
G+ G+ GA RGA RG +P RDG +P L G A + P G P ++
Sbjct: 208 GSQGKPGARGMRGA-RGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPTGEPGADVEHQI 266
Query: 398 GLQVADTSVAGQER*GGRCPDVQRAGVGVADVPAGR 505
GL A + G + R G+A P R
Sbjct: 267 GLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGER 302
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PG+ G RG G P +DG P +G S E QP G+P
Sbjct: 211 GEPGQPGQPGQRGPA-GEPGKDGSPGGQGEKGASGEPGQPGRDGQP 255
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+T G +S PPP G
Sbjct: 163 KGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKG 195
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+ G +S PPP G
Sbjct: 225 KGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKG 257
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+ G +S PPP G
Sbjct: 38 KGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKG 70
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+ G +S PPP G
Sbjct: 101 KGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKG 133
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+ G +S PPP G
Sbjct: 132 KGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKG 164
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+ G +S PPP G
Sbjct: 194 KGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKG 226
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAG 367
+G G P G P L+ G +S PPP G
Sbjct: 256 KGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKG 288
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGR-GVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G GR+G AGR G P + G +GE + QP P GRP
Sbjct: 209 GKDGRKGRGHPGTAGRPGQPGKQGSAGNPGRKGERGQDGQPGPGGRP 255
>U80027-12|AAC48126.2| 493|Caenorhabditis elegans Hypothetical
protein T28A11.17 protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 62 SENVQSENIQNIKSMFMIISRRRRHGAPEEQWHNELE 172
SEN+ E++ N+ + M++ R A EEQ N LE
Sbjct: 359 SENITHEDLPNLLGLRMVMKMVARKSANEEQLKNALE 395
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPATC 382
G PG G +G G+G G P Q G E QP G P +C
Sbjct: 289 GPPGENG----KGGGQGPSGLPGPPGQPGQNGAPGEVGQPGDNGAPGSC 333
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPATC 382
G PG G +G G+G G P Q G E QP G P +C
Sbjct: 270 GPPGENG----KGGGQGPSGLPGPPGQPGQNGAPGEVGQPGDNGAPGSC 314
>AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical
protein C17B7.8 protein.
Length = 558
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 62 SENVQSENIQNIKSMFMIISRRRRHGAPEEQWHNELE 172
SEN+ E++ N+ + M++ R A EEQ N LE
Sbjct: 401 SENITHEDLPNLLGLRMVMKMVARKSANEEQLKNALE 437
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQP--PPAGRP 373
GAPG+ G+ G G P G+P +GE+ E V P PAG P
Sbjct: 575 GAPGKPGSAGSDGLS-GSPGLPGIPGYPGMKGEAGEIVGPMENPAGIP 621
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 700 HTHTSAERWQRTTLGALEP-PSRCTLDTSSNCRDPVRCAGAASICVALGSVAMAH 539
H H + R ++ L P P++ SS CR+P+ C CV G+ +++
Sbjct: 59 HPHYTETRDEKGRLPKCAPLPAKIGARCSSKCREPLFCRNGECQCVQRGTTRVSN 113
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPAT 379
G+PG +G G G P DG P Q G QP AG P T
Sbjct: 215 GSPGPQGPPGQNG-NDGQPGNDGAPGQPGQPGPDGHPGQPGNAGPPGT 261
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 233 CGAPGREGALQ*RGAG--RGVPMRDGVPHQLATRGESSEAVQP--PPAGRP 373
CG PG G + G+ G P G+P +GE+ E V P PAG P
Sbjct: 572 CGMPGAPGKPRSAGSDGLSGSPGLPGIPGYPGMKGEAGEIVGPMENPAGIP 622
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = -3
Query: 372 GRPAGGGCTASELSPRVASWCGTPSRIGTP---RPAPLYCNAPSRPGAP 235
GRP G + P A GTP + G P R P P +PG P
Sbjct: 171 GRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGEP 219
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PG +G G G+P RDG+P +G+ ++ QP +G P
Sbjct: 1105 GFPGMKGESGYPGQD-GLPGRDGLPGVPGQKGDLGQSGQPGLSGAP 1149
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PG +G G G+P RDG+P +G+ ++ QP +G P
Sbjct: 1104 GFPGMKGESGYPGQD-GLPGRDGLPGVPGQKGDLGQSGQPGLSGAP 1148
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PG +G G G+P RDG+P +G+ ++ QP +G P
Sbjct: 1104 GFPGMKGESGYPGQD-GLPGRDGLPGVPGQKGDLGQSGQPGLSGAP 1148
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PG +G G G+P RDG+P +G+ ++ QP +G P
Sbjct: 1105 GFPGMKGESGYPGQD-GLPGRDGLPGVPGQKGDLGQSGQPGLSGAP 1149
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PG +G G G+P RDG+P +G+ ++ QP +G P
Sbjct: 1141 GFPGMKGESGYPGQD-GLPGRDGLPGVPGQKGDLGQSGQPGLSGAP 1185
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 189 GCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEM-VFRTNWLLVVKARKPYSLLLL 365
G + CC + + N P+V + + + E C + + T+++ K R+P L LL
Sbjct: 578 GVYYCCRPPMMILQNNAPIVPQVEGVSDRVTEYIACSLGILYTDFVKPKKKRQPEYLKLL 637
Query: 366 DDQQRAFKAE 395
D +RA K +
Sbjct: 638 RD-RRASKLD 646
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPATCLQS 391
GAPG G G G P ++G P Q +G S + QP G P Q+
Sbjct: 217 GAPGEAGPQGPPGQP-GTPGQNGQPGQPGPKGPSGQPGQPGSDGNPGPAGQA 267
>AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical
protein Y111B2A.4 protein.
Length = 459
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -2
Query: 424 NARIGDLKTTSALKARCWSSSRRRLYGFRAFTTSSQLVRNTISHRDTSPSSSLL 263
+A+I DLKT + A ++ GF+ T++Q N ++ R S ++L+
Sbjct: 289 DAQIEDLKTQNKELANAYTELNEEFEGFKEQHTATQNANNDLNRRIDSLKANLI 342
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3348 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3400
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3360 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3412
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3246 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3298
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3247 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3299
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3329 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3381
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3348 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3400
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3360 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3412
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3246 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3298
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3247 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3299
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3329 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3381
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = -3
Query: 375 AGRPAGGGCTASELSPRVASWCGTPSRIGTPRPAPLYCNAPSRPGAPHYRHAGQ 214
AG P G P G P GTP YC P+R +R+ +
Sbjct: 233 AGPPGPAGPNGQPGHPGQDGQPGAPGNDGTPGSDAAYCPCPTRSSVLRHRNVNR 286
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = -3
Query: 375 AGRPAGGGCTASELSPRVASWCGTPSRIGTPRPAPLYCNAPSRPGAPHYRHAGQ 214
AG P G P G P GTP YC P+R +R+ +
Sbjct: 233 AGPPGPAGPNGQPGHPGQDGQPGAPGNDGTPGSDAAYCPCPTRSSVLRHRNVNR 286
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPAT 379
GAPG+ GA RGA G P G P G S + P G P +
Sbjct: 217 GAPGQPGADGQRGA--GTPGAPGAPGNAGPAGPSGQDGFPGQDGAPGS 262
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPAT 379
GAPG+ GA RGA G P G P G S + P G P +
Sbjct: 201 GAPGQPGADGQRGA--GTPGAPGAPGNAGPAGPSGQDGFPGQDGAPGS 246
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 236 GAPGREGALQ*RGA-GR-GVPMRDGVPHQLATRGESSEAVQPPPAGRPATCLQS 391
GAPG +GA +G G+ G P DG P +G + QP G P QS
Sbjct: 216 GAPGPQGAPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQS 269
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G+PGR G RG G+ G P Q +RG QP GRP
Sbjct: 194 GSPGRPGRDGTRGVGQ-----PGSPGQPGSRGPEGPRGQPGNMGRP 234
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRP 373
G PGR G RG G P +DG +G + E QP G+P
Sbjct: 209 GEPGRPGQPGSRGPA-GQPGKDGAQGGPGEKGANGEPGQPGRDGQP 253
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.9 bits (59), Expect = 7.5
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRG-ESSEAVQPPPAGRPATCLQS*GGLQVA 412
G PG+ G + GVP RDG P G + S +Q PP GR T G V+
Sbjct: 494 GPPGQPGVM-------GVPGRDGDPGTDGEHGQDGSPGIQGPP-GRDGTSGPD-GQPGVS 544
Query: 413 DTSVAGQER*GGRCPDVQRA 472
G + GG CP +R+
Sbjct: 545 APGAPGTD--GGYCPCPKRS 562
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3360 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3412
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3360 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3412
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 423 TLVSAT*RPPQL*RHVAG--RPAGGGCTASELSPRVASWCGTPSRIGTPRPAPL 268
T+ S+T R P A +P+GG T E + R +W G PS + + PL
Sbjct: 3360 TITSSTHRAPSPVFATASVSQPSGGATTTREFT-RTINWHGQPSELRNSQTDPL 3412
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +2
Query: 236 GAPGREGALQ*RGA--GRGVPMRDGVPHQLATRGESSEAVQPP--PAG 367
G PG GA GA G P +DG P Q RG + P PAG
Sbjct: 172 GQPGGPGAQGDAGAPGNDGTPGQDGAPGQNGQRGNGAAGAPGPQGPAG 219
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -3
Query: 375 AGRPAGGGCTASELSPRVASWCGTPSRIGTP-RPA-PLYCNAPSRPGAP 235
+GRP G P + GTP + G P P P P PGAP
Sbjct: 214 SGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTPGTPGAP 262
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPATC 382
G PGR G G G+P + G P GE + QP G P C
Sbjct: 182 GQPGRNGKDGLPGVP-GLPGQPGEPGDDGEPGEDGDPGQPGDNGEPGKC 229
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPAT 379
GAPG G G G G P G + EA P PAG P T
Sbjct: 162 GAPGDPGEAGTPGRP-GTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGT 208
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPAT 379
GAPG G G G G P G + EA P PAG P T
Sbjct: 157 GAPGDPGEAGTPGRP-GTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGT 203
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -3
Query: 348 TASELSPRVASWCGTPSRIGTPRPAPL 268
+AS ++PR AS C +PS+ TP+ +PL
Sbjct: 286 SASSITPR-ASVCNSPSKDVTPKCSPL 311
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 378 VAGRPAGGGCTASELSPRVASWCGTPSRIGTPRPAPLYCNAPSRPGAP 235
+ G GGG P A+ CG S PA Y P GAP
Sbjct: 18 IGGLGGGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAP 65
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 378 VAGRPAGGGCTASELSPRVASWCGTPSRIGTPRPAPLYCNAPSRPGAP 235
+ G GGG P A+ CG S PA Y P GAP
Sbjct: 18 IGGLGGGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAP 65
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 378 VAGRPAGGGCTASELSPRVASWCGTPSRIGTPRPAPLYCNAPSRPGAP 235
+ G GGG P A+ CG S PA Y P GAP
Sbjct: 18 IGGLGGGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAP 65
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 236 GAPGREGALQ*RGAGRGVPMRDGVPHQLATRGESSEAVQPPPAGRPAT 379
GAPG G G G G P G + EA P PAG P T
Sbjct: 157 GAPGDPGEAGTPGRP-GTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGT 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,807,970
Number of Sequences: 27780
Number of extensions: 333776
Number of successful extensions: 1303
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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