Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4i06
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 57 1e-08
08_01_0577 + 5132876-5132894,5134352-5134845,5134937-5135162,513... 56 3e-08
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850... 54 1e-07
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 47 3e-07
07_03_0649 - 20260501-20260512,20260620-20260833,20261207-202614... 48 5e-06
07_03_0644 - 20242283-20242294,20242402-20242615,20242989-202432... 48 5e-06
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 43 2e-04
08_02_0305 + 15586044-15586073,15586846-15586968,15587060-155872... 42 3e-04
08_01_0035 - 262750-262962,263046-263277,263420-263627,263762-26... 32 0.36
04_04_1697 - 35454337-35454576,35454657-35454888,35455045-354552... 32 0.36
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 30 1.4
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 30 1.4
05_01_0165 - 1139271-1139417,1139549-1139777,1139889-1139992,114... 30 1.9
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 29 2.5
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 29 2.5
01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771... 29 4.4
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449... 28 5.8
12_01_0654 - 5542349-5542480,5542491-5542666,5542835-5542937,554... 28 7.7
11_04_0093 + 13407686-13409554 28 7.7
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 28 7.7
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/122 (27%), Positives = 56/122 (45%)
Frame = +3
Query: 234 GSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXG 413
G +TL +G L WY+ + N+ K L P+P+ +T VQ G
Sbjct: 100 GGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWIT-G 158
Query: 414 VRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 593
+ + ++PLA+ + L + +S+ KV VS+ HT+KA P ++ L+ +
Sbjct: 159 ILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFL 218
Query: 594 GE 599
GE
Sbjct: 219 GE 220
>08_01_0577 +
5132876-5132894,5134352-5134845,5134937-5135162,
5135695-5135917,5136315-5136528,5136769-5136806,
5136977-5137142
Length = 459
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 186 CFRVLSDKKKSAMGTTGSRRET---LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMT 356
C +D K+S R E L + A W+ L+ N+ K L P+P +
Sbjct: 77 CAASAADDKESKTEVVPVRSEAAQKLKISIYFATWWALNVIFNIYNKKVLNAFPYPWLTS 136
Query: 357 AVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYA 536
+ V + + ++W +VL P+A+A + + + VS+ KV VS+
Sbjct: 137 TLSLACGSAMMLVSWATRLVEAPKTDLDFW-KVLFPVAVAHTIGHVAATVSMSKVAVSFT 195
Query: 537 HTVKATTPLWTAGLARVLFGE 599
H +K+ P ++ ++R L GE
Sbjct: 196 HIIKSAEPAFSVLVSRFLLGE 216
>05_03_0110 +
8500204-8500460,8502544-8502612,8502725-8502790,
8502885-8502963,8504270-8504390,8504486-8504581,
8505403-8505515,8505612-8505689,8507777-8507893,
8508194-8508293,8508463-8508563,8509093-8509110
Length = 404
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = +3
Query: 240 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVR 419
R L+ GF WY L+ N++ K P+P +V G+
Sbjct: 96 RYPALVTGFFFFMWYFLNVIFNILNKKIFDYFPYPY-FVSVSHLLVGVLYCLVGWSFGLP 154
Query: 420 STRWPTNYWT-RVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFG 596
R P N ++L P+A+ + + S VS V VS+AHT+KA P + A ++ + G
Sbjct: 155 K-RAPINSTVLKLLFPVAVCHAIGHVTSTVSFAAVAVSFAHTIKALEPFFNAAASQFILG 213
Query: 597 ERV 605
++V
Sbjct: 214 QQV 216
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 46.8 bits (106), Expect(2) = 3e-07
Identities = 30/95 (31%), Positives = 45/95 (47%)
Frame = +3
Query: 324 LTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQ 503
L LPFP T+TA Q + R + ++ PLA +L T+ +
Sbjct: 143 LQPLPFPYTITAFQLAFGSFVIFLMWALKLHPAPRISISQLAKI-APLAAGHMLGTVFTN 201
Query: 504 VSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 608
+S+ KV VS+ HT+KA+ P +T L+ GE S
Sbjct: 202 MSLSKVAVSFTHTIKASEPFFTVLLSAFFLGETPS 236
Score = 25.4 bits (53), Expect(2) = 3e-07
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 204 DKKKSAMGTTGSRRETLIVGFLCAAWYMLSSASNVVGK 317
D +A G+ ET +G + AWY+L+ N+ K
Sbjct: 77 DADAAAGRERGALAETAQLGAMIVAWYLLNIYFNIYNK 114
>07_03_0649 -
20260501-20260512,20260620-20260833,20261207-20261429,
20261706-20261931,20262051-20262494
Length = 372
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/114 (23%), Positives = 50/114 (43%)
Frame = +3
Query: 258 VGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPT 437
+G A W+ L+ N+ K L P+P + + +
Sbjct: 81 IGVYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLAAGSAIMLASWATRIAEAPATDL 140
Query: 438 NYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 599
++W + L P+AIA + + + VS+ KV VS+ H +K+ P ++ ++R GE
Sbjct: 141 DFW-KALSPVAIAHTIGHVAATVSMAKVAVSFTHIIKSGEPAFSVLVSRFFLGE 193
>07_03_0644 -
20242283-20242294,20242402-20242615,20242989-20243211,
20243488-20243713,20243833-20244276
Length = 372
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/114 (23%), Positives = 50/114 (43%)
Frame = +3
Query: 258 VGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPT 437
+G A W+ L+ N+ K L P+P + + +
Sbjct: 81 IGVYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLAAGSAIMLASWATRIAEAPATDL 140
Query: 438 NYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 599
++W + L P+AIA + + + VS+ KV VS+ H +K+ P ++ ++R GE
Sbjct: 141 DFW-KALSPVAIAHTIGHVAATVSMAKVAVSFTHIIKSGEPAFSVLVSRFFLGE 193
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/99 (27%), Positives = 44/99 (44%)
Frame = +3
Query: 312 GKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTT 491
G L +PFP T+T Q R + ++L PLA+ +
Sbjct: 107 GLQVLKSVPFPYTITTFQFASGSFFITLMWLLNLHPKPRLSLGQYAKIL-PLALVHTMGN 165
Query: 492 LCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 608
+ + +S+ KV VS+ HT+KA P ++ L+ + GE S
Sbjct: 166 VFTNMSLGKVAVSFTHTIKAMEPFFSVLLSVLFLGETPS 204
>08_02_0305 +
15586044-15586073,15586846-15586968,15587060-15587212,
15587313-15587398,15588327-15588411,15588796-15588864,
15589261-15589326
Length = 203
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/94 (26%), Positives = 43/94 (45%)
Frame = +3
Query: 318 LALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLC 497
+ L P+P+ +T VQ +R + +L PLA+ + L
Sbjct: 10 MVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKISGAQLFAIL-PLAVVHTMGNLF 68
Query: 498 SQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 599
+ +S+ KV VS+ HT+KA P ++ L+ + GE
Sbjct: 69 TNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGE 102
>08_01_0035 -
262750-262962,263046-263277,263420-263627,263762-264011,
265232-265342
Length = 337
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 432 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWT 569
P + W R+ P++ + + VS+ +PVS+ T+K+ TP T
Sbjct: 76 PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 120
>04_04_1697 -
35454337-35454576,35454657-35454888,35455045-35455252,
35455380-35455629,35456232-35456354
Length = 350
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 432 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWT 569
P + W R+ P++ + + VS+ +PVS+ T+K+ TP T
Sbjct: 80 PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 124
>11_06_0223 -
21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 501 QVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 608
Q++I K+PV Y H P WT G+A +L VS
Sbjct: 625 QLTIKKLPVFYKHRDFLFFPAWTFGVANILLKVPVS 660
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -1
Query: 583 RASPAVQRGVVAFTVWA*ETGTFQMETCEHSVVRSLAIAKGTKTRVQ*FVGHR 425
R P GV AF W+ ++ +F + +C+ R L + KG + FVGHR
Sbjct: 136 RTIPGFAAGVTAFD-WSPDS-SFLLASCKDLTARLLPVKKGLGGKPFLFVGHR 186
>05_01_0165 -
1139271-1139417,1139549-1139777,1139889-1139992,
1140097-1140639
Length = 340
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 486 TTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGER 602
+ + VS+ +PVS+ V ATTP +TA LA + R
Sbjct: 122 SVVAGNVSLRYLPVSFNQAVGATTPFFTAVLAYAVAARR 160
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 347 NYDSGTAVCSGLAECTRASPVWSTFDAMADELLDPCLSTLGDRQTSYHTVLASFHLESAS 526
NY+SG AV L + + S STFD A + D L R+ Y +E A
Sbjct: 500 NYNSGNAVAYALLDGNKQSAFLSTFDKSAFKSSDKLLLAYKPRRGRYAVYDNEVTMEEAE 559
Query: 527 LL 532
L
Sbjct: 560 SL 561
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 486 TTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 608
+ + VS+ +PVS+ V ATTP +TA A ++ +R S
Sbjct: 103 SVVSGNVSLRYLPVSFNQAVGATTPFFTAVFAYIMTVKRES 143
>01_01_0977 -
7717808-7717837,7718227-7718327,7718449-7718548,
7718706-7718822,7718913-7718990,7719980-7720058,
7720184-7720249,7720373-7720441,7720890-7721188
Length = 312
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 252 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAV 362
LI GF WY L+ N++ K P+P ++ +
Sbjct: 114 LITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVI 150
>08_02_1420 +
26942777-26942905,26944415-26944511,26944596-26944962,
26945286-26945793
Length = 366
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 476 QTSYHTVLASFHLESASLLCPH 541
QTSYHTV + S+SL+CP+
Sbjct: 73 QTSYHTVGDHSNAASSSLVCPY 94
>12_01_0654 -
5542349-5542480,5542491-5542666,5542835-5542937,
5542971-5543084,5543104-5543163,5543258-5544316
Length = 547
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 335 TISTNYDSGTAVCSGLAECTRASPVWSTFDAMADEL 442
++STN+++ T + + T + P + T+DA+ + L
Sbjct: 262 SVSTNFNAETLISKIIQSVTLSKPSFDTYDALQEHL 297
>11_04_0093 + 13407686-13409554
Length = 622
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 227 YNRLQARDTNSWLPVRSVVYVKFSQ*CRGQTGINRATISTNYDSGTAVCSGLAECTRASP 406
+NR+ RD SW + V+ R + R + + S T + SGLA
Sbjct: 158 FNRMPVRDAGSW-NILLCGLVRSGSLERARKMFERMPVR-DVMSWTTMISGLARNGSVDD 215
Query: 407 VWSTFDAMAD 436
W FDAM +
Sbjct: 216 AWVLFDAMPE 225
>04_04_1657 -
35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 7 CHMPHSH*IKMK-LFRVTLQYNLSKPDYQKC-ICYTKLSRVL 126
C + H H K R L N KP Y+ C CY KLS+VL
Sbjct: 658 CGLVHCHSCSSKKALRAALSPNPGKP-YRVCDSCYLKLSKVL 698
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,174,152
Number of Sequences: 37544
Number of extensions: 351259
Number of successful extensions: 980
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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