Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4i01
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal p... 124 4e-28
Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal p... 124 4e-28
Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal p... 124 4e-28
BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal... 124 4e-28
BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal... 124 4e-28
Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal p... 124 5e-28
Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal p... 119 1e-26
U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15 prot... 58 3e-08
CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein. 58 5e-08
BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal... 58 5e-08
AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated ant... 52 3e-06
>Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 218
Score = 124 bits (299), Expect = 4e-28
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 190 KYKEFA---IPEEEAEWVG 205
>Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 124 bits (299), Expect = 4e-28
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 190 KYKEFA---IPEEEAEWVG 205
>Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 240
Score = 124 bits (299), Expect = 4e-28
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 190 KYKEFA---IPEEEAEWVG 205
>BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 124 bits (299), Expect = 4e-28
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGYYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 190 KYKEFA---IPEEEAEWVG 205
>BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 124 bits (299), Expect = 4e-28
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 190 KYKEFA---IPEEEAEWVG 205
>Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 194
Score = 124 bits (298), Expect = 5e-28
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTY 731
+YK +
Sbjct: 190 KYKEF 194
>Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 119 bits (287), Expect = 1e-26
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 539
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LK DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 190 KYKEFA---IPEEEAEWVG 205
>U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15
protein.
Length = 128
Score = 58.4 bits (135), Expect = 3e-08
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S ++LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMELKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 62 KYKEFA---IPEEEAEWVG 77
>CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein.
Length = 128
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 62 KYKEFA---IPEEEAEWVG 77
>BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 128
Score = 57.6 bits (133), Expect = 5e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 540 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 716
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 717 EYKTYLSSYTPEEN*NGMG 773
+YK + PEE +G
Sbjct: 62 KYKEFA---IPEEEAEWVG 77
>AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ39525 fis, clone PUAEN2002758. ).
Length = 158
Score = 56.4 bits (130), Expect = 1e-07
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +3
Query: 186 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 365
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 366 KFPAEINEGIWGGEAVVKG 422
FP E G+WGGE + G
Sbjct: 70 YFPPESQRGLWGGEGWILG 88
>AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated
antigen recgonized by T lymphocytes ; P15 protein.
Length = 131
Score = 51.6 bits (118), Expect = 3e-06
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +3
Query: 540 RTISLINDHYGFDHYLLK---TPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQME 707
RT+ LI++ YG D Y+LK TP DL S + LK+ +L L P+ H DP+++
Sbjct: 2 RTLDLIDEAYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAA 61
Query: 708 IYEEYKTYLSSYTPEEN*NGMG 773
IY++YK + PEE +G
Sbjct: 62 IYDKYKEFA---IPEEEAEWVG 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,109,237
Number of Sequences: 237096
Number of extensions: 2267194
Number of successful extensions: 4209
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4189
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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