Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4i01
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-827|AAF52188.1|  302|Drosophila melanogaster CG3782-PA ...   255   6e-68
AY075494-1|AAL68304.1|  302|Drosophila melanogaster RE47667p pro...   248   5e-66

>AE014134-827|AAF52188.1|  302|Drosophila melanogaster CG3782-PA
           protein.
          Length = 302

 Score =  255 bits (624), Expect = 6e-68
 Identities = 110/197 (55%), Positives = 151/197 (76%)
 Frame = +3

Query: 165 QLSKTFKKKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPI 344
           +L   +K+ GRF+ G+ ++LP AY+KFWREWK+  PAAVH++P+E +W+RDE+T    P+
Sbjct: 10  KLLNGWKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPV 69

Query: 345 QNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLS 524
           QNIP+PL    E + GIWGGEAV+KGFQKR+  +RRVPH+WVP L+R+VV S VL+ ++S
Sbjct: 70  QNIPLPLIDTPESHRGIWGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMS 129

Query: 525 VTVTDRTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPRHAYDPKKQM 704
           V VT+RT+  I++ +GFDHYLLK  ACDL S LALKLK+++L  L NG P  A +P++Q 
Sbjct: 130 VVVTERTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADEPERQQ 189

Query: 705 EIYEEYKTYLSSYTPEE 755
           E+ +EY+ YL  YTPEE
Sbjct: 190 EVLKEYRRYLEPYTPEE 206


>AY075494-1|AAL68304.1|  302|Drosophila melanogaster RE47667p
           protein.
          Length = 302

 Score =  248 bits (608), Expect = 5e-66
 Identities = 108/197 (54%), Positives = 150/197 (76%)
 Frame = +3

Query: 165 QLSKTFKKKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPI 344
           +L   +K+ GRF+ G+ ++LP AY+KFWREWK+  PAAVH++P+E +W+RDE+T    P+
Sbjct: 10  KLLNGWKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPV 69

Query: 345 QNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLS 524
           QNIP+PL    E + G+ GGEAV+KGFQKR+  +RRVPH+WVP L+R+VV S VL+ ++S
Sbjct: 70  QNIPLPLIDTPESHRGMGGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMS 129

Query: 525 VTVTDRTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPRHAYDPKKQM 704
           V VT+RT+  I++ +GFDHYLLK  ACDL S LALKLK+++L  L NG P  A +P++Q 
Sbjct: 130 VVVTERTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADEPERQQ 189

Query: 705 EIYEEYKTYLSSYTPEE 755
           E+ +EY+ YL  YTPEE
Sbjct: 190 EVLKEYRRYLEPYTPEE 206


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,968,820
Number of Sequences: 53049
Number of extensions: 671019
Number of successful extensions: 1735
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)