Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4h07
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   3.1  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   9.6  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 423  HNYDYSDDVKHEDIIQEADLEVKIEPVEHDEPET 524
            +NYD +DD+  ED       + ++ P EH +  T
Sbjct: 1055 YNYDGTDDIDDEDTYDYEQPDYELPP-EHSDVTT 1087


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 345  KFLTEGLDSLSINPFLLQS 401
            K L EGLD L  +PFL+++
Sbjct: 1554 KTLAEGLDDLRSDPFLVEA 1572


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 388 FCCNHSCKSIIY 423
           +CC+H C +I Y
Sbjct: 129 YCCSHLCLAIFY 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,044
Number of Sequences: 2352
Number of extensions: 11546
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)