Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4h07
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    33   0.39 
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    33   0.39 
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA...    32   0.91 
AY118320-1|AAM48349.1|  696|Drosophila melanogaster LD06204p pro...    30   2.8  
AY113649-1|AAM29654.1|  701|Drosophila melanogaster SD12335p pro...    30   2.8  
AE013599-3865|AAS64768.1|  696|Drosophila melanogaster CG3419-PB...    30   2.8  
AE013599-3864|AAF47201.1|  830|Drosophila melanogaster CG3419-PA...    30   2.8  
AY075384-1|AAL68222.1|  787|Drosophila melanogaster LD23641p pro...    30   3.7  
AE014297-4205|AAF56765.1|  787|Drosophila melanogaster CG5520-PA...    30   3.7  
BT010308-1|AAQ23626.1|  680|Drosophila melanogaster AT31531p pro...    29   8.5  
AF132565-1|AAD27864.2| 1484|Drosophila melanogaster LD23835p pro...    29   8.5  
AF080399-1|AAC32190.1| 1461|Drosophila melanogaster mitotic chec...    29   8.5  
AE014296-2302|AAN11829.1|  680|Drosophila melanogaster CG10743-P...    29   8.5  
AE014296-2301|AAF49801.1|  680|Drosophila melanogaster CG10743-P...    29   8.5  
AE013599-122|AAF57298.1| 1460|Drosophila melanogaster CG7838-PA ...    29   8.5  

>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 22/81 (27%), Positives = 44/81 (54%)
 Frame = +3

Query: 273 RICWECKALLRKFEIFKQKAKSAFKFLTEGLDSLSINPFLLQSQLQIYHLHNYDYSDDVK 452
           RIC EC+  L K  +F+Q+ + A K L + +  L +     +S++      +YD  D+++
Sbjct: 58  RICQECRYQLEKSFLFRQRCQWAEKKLRKHIRLLGLGK---RSRVFSKDPDDYD-EDELE 113

Query: 453 HEDIIQEADLEVKIEPVEHDE 515
            ED I   +++ K+  +E ++
Sbjct: 114 FEDSIAFIEVQDKVRKLEDEK 134


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 22/81 (27%), Positives = 44/81 (54%)
 Frame = +3

Query: 273 RICWECKALLRKFEIFKQKAKSAFKFLTEGLDSLSINPFLLQSQLQIYHLHNYDYSDDVK 452
           RIC EC+  L K  +F+Q+ + A K L + +  L +     +S++      +YD  D+++
Sbjct: 58  RICQECRYQLEKSFLFRQRCQWAEKKLRKHIRLLGLGK---RSRVFSKDPDDYD-EDELE 113

Query: 453 HEDIIQEADLEVKIEPVEHDE 515
            ED I   +++ K+  +E ++
Sbjct: 114 FEDSIAFIEVQDKVRKLEDEK 134


>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
            protein.
          Length = 1465

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +3

Query: 435  YSDDVKHEDIIQEADLEVKIEPVEHDEPETFVN 533
            +SDD   +D ++E D E   EPVE + PETFV+
Sbjct: 1126 FSDDEDSDDEVEEFDEESDAEPVE-EIPETFVD 1157


>AY118320-1|AAM48349.1|  696|Drosophila melanogaster LD06204p
           protein.
          Length = 696

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 183 IRGHCSGMQSTRYSFSYLNLKLSVFV 106
           +RG CS  Q   +SF+YLN + S FV
Sbjct: 639 LRGTCSAEQLPAFSFAYLNKQFSSFV 664


>AY113649-1|AAM29654.1|  701|Drosophila melanogaster SD12335p
           protein.
          Length = 701

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 435 YSDDVKHEDIIQEADLEVKIEPVEHDEPETFVN 533
           +SDD   +D ++E + E   EPVE + PETFV+
Sbjct: 362 FSDDEDSDDEVEEFEEESDAEPVE-EIPETFVD 393


>AE013599-3865|AAS64768.1|  696|Drosophila melanogaster CG3419-PB,
           isoform B protein.
          Length = 696

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 183 IRGHCSGMQSTRYSFSYLNLKLSVFV 106
           +RG CS  Q   +SF+YLN + S FV
Sbjct: 639 LRGTCSAEQLPAFSFAYLNKQFSSFV 664


>AE013599-3864|AAF47201.1|  830|Drosophila melanogaster CG3419-PA,
           isoform A protein.
          Length = 830

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 183 IRGHCSGMQSTRYSFSYLNLKLSVFV 106
           +RG CS  Q   +SF+YLN + S FV
Sbjct: 639 LRGTCSAEQLPAFSFAYLNKQFSSFV 664


>AY075384-1|AAL68222.1|  787|Drosophila melanogaster LD23641p
           protein.
          Length = 787

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 394 SKNGFMLNESNPSVRNLKALLA-FCLNISNLRNKALHSQQIRRQISDALT 248
           +K GF LNES  S +N ++L + F   +  L + AL  Q  + Q+S+ L+
Sbjct: 589 AKEGFQLNESEKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERLS 638


>AE014297-4205|AAF56765.1|  787|Drosophila melanogaster CG5520-PA
           protein.
          Length = 787

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 394 SKNGFMLNESNPSVRNLKALLA-FCLNISNLRNKALHSQQIRRQISDALT 248
           +K GF LNES  S +N ++L + F   +  L + AL  Q  + Q+S+ L+
Sbjct: 589 AKEGFQLNESEKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERLS 638


>BT010308-1|AAQ23626.1|  680|Drosophila melanogaster AT31531p
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 171 NGRVLHSIENTIYSKFYIQFVYESSSVNASEICL-RICWECKALLRK 308
           +GR+LH +     S+ ++      +S+ A  +C+ R+ W  + L+R+
Sbjct: 465 DGRMLHRLTLEDLSQLHVSSCLHIASLRAGILCMRRLSWNAEGLIRR 511


>AF132565-1|AAD27864.2| 1484|Drosophila melanogaster LD23835p
           protein.
          Length = 1484

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +3

Query: 291 KALLRKFEIFKQKAKSAFKFLTEGLDSLSINPFLLQSQLQIYHLHNYDYSDDVKHEDIIQ 470
           K L++ F  F +K K   +F  +  ++  I   L  +   I   ++YD S +++  D I 
Sbjct: 124 KRLIKLFIKFMEKQKDKIEFYQQMYNN-GIGTML--ADFYIAWAYSYDLSGNMRKADEIF 180

Query: 471 EADLEVKIEPVE 506
              LE + EP+E
Sbjct: 181 RLGLECRAEPLE 192


>AF080399-1|AAC32190.1| 1461|Drosophila melanogaster mitotic
           checkpoint control proteinkinase BUB1 protein.
          Length = 1461

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +3

Query: 291 KALLRKFEIFKQKAKSAFKFLTEGLDSLSINPFLLQSQLQIYHLHNYDYSDDVKHEDIIQ 470
           K L++ F  F +K K   +F  +  ++  I   L  +   I   ++YD S +++  D I 
Sbjct: 100 KRLIKLFIKFMEKQKDKIEFYQQMYNN-GIGTML--ADFYIAWAYSYDLSGNMRKADEIF 156

Query: 471 EADLEVKIEPVE 506
              LE + EP+E
Sbjct: 157 RLGLECRAEPLE 168


>AE014296-2302|AAN11829.1|  680|Drosophila melanogaster CG10743-PB,
           isoform B protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 171 NGRVLHSIENTIYSKFYIQFVYESSSVNASEICL-RICWECKALLRK 308
           +GR+LH +     S+ ++      +S+ A  +C+ R+ W  + L+R+
Sbjct: 465 DGRMLHRLTLEDLSQLHVSSCLHIASLRAGILCMRRLSWNAEGLIRR 511


>AE014296-2301|AAF49801.1|  680|Drosophila melanogaster CG10743-PA,
           isoform A protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 171 NGRVLHSIENTIYSKFYIQFVYESSSVNASEICL-RICWECKALLRK 308
           +GR+LH +     S+ ++      +S+ A  +C+ R+ W  + L+R+
Sbjct: 465 DGRMLHRLTLEDLSQLHVSSCLHIASLRAGILCMRRLSWNAEGLIRR 511


>AE013599-122|AAF57298.1| 1460|Drosophila melanogaster CG7838-PA
           protein.
          Length = 1460

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +3

Query: 291 KALLRKFEIFKQKAKSAFKFLTEGLDSLSINPFLLQSQLQIYHLHNYDYSDDVKHEDIIQ 470
           K L++ F  F +K K   +F  +  ++  I   L  +   I   ++YD S +++  D I 
Sbjct: 100 KRLIKLFIKFMEKQKDKIEFYQQMYNN-GIGTML--ADFYIAWAYSYDLSGNMRKADEIF 156

Query: 471 EADLEVKIEPVE 506
              LE + EP+E
Sbjct: 157 RLGLECRAEPLE 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,871,094
Number of Sequences: 53049
Number of extensions: 481669
Number of successful extensions: 1333
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)