Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4h05
(359 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 45 8e-07
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 45 8e-07
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 44 2e-06
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 43 3e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 42 7e-06
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 42 9e-06
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 40 2e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 40 2e-05
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 39 7e-05
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 39 7e-05
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 39 7e-05
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 37 3e-04
CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 22 6.1
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 45.2 bits (102), Expect = 8e-07
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +2
Query: 14 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDREXPP--DSKXVVNLTLHL 187
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 188 RHANIRESESTVRILAD---LQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 355
+ + + + +I+ ++ +W D L W E+G L V S+ +WRPD+VL N
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 356 A 358
A
Sbjct: 120 A 120
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 45.2 bits (102), Expect = 8e-07
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +2
Query: 14 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDREXPP--DSKXVVNLTLHL 187
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 188 RHANIRESESTVRILAD---LQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 355
+ + + + +I+ ++ +W D L W E+G L V S+ +WRPD+VL N
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 356 A 358
A
Sbjct: 120 A 120
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +2
Query: 119 LLATYDREXPPDSKX---VVNLTLHLRHANIRESESTVRILADLQMNWIDKXLSWNAGEW 289
LL YD P V + + H I E +ST+ + ++ +W D L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 290 G-CSTWLVSSERLWRPDVVLLNAA 358
G + +WRPDVVL N A
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNA 129
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 43.2 bits (97), Expect = 3e-06
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDREXPPDSKXV--VNLTLHLRHANIRESESTVRILAD---LQMNWIDKXLS 271
+ D LL+ Y+R P S V + L LR + + + +IL L+ W D
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIWLEHEWQDHKFK 98
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
W+ E+G T L V SE +W PD+VL N A
Sbjct: 99 WDPAEYGGVTELYVPSEHIWLPDIVLYNNA 128
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +2
Query: 107 MIDSLLATYDREXPP----DSKXVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKX 265
+ D LL+ Y+R P + V + L L N++ T + ++ W D
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 266 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 358
L WN ++G T V SE +W PD+VL N A
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 116
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 41.5 bits (93), Expect = 9e-06
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATY---DREXPPDSKXV-VNLTLHLRHA-NIRESESTVRILADLQMNWIDKXLS 271
++++LLATY +R +S + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
WN E+G L ++ +LW+PDV++ N+A
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSA 116
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 40.3 bits (90), Expect = 2e-05
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +2
Query: 107 MIDSLLATYDREXPPDSKXVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKXLS 271
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLN 352
W+ E+G L V SE++W PD+VL N
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 40.3 bits (90), Expect = 2e-05
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Frame = +2
Query: 65 ASAAECENATSLSLMIDSLLATYDREXPPDSKXVVNLTLHLR-------HANIRESESTV 223
A + C + D LL+ Y++ P LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 224 RILADLQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
+ ++ W D L W E+G L V S+ +WRPD+VL N A
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 116
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 38.7 bits (86), Expect = 7e-05
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 239 LQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
L++ W D + WN+ E+G L + RLW+PDV++ N+A
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSA 99
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 38.7 bits (86), Expect = 7e-05
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDREXPP--DSKXVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKXLS 271
++++LLATY+ P + + + L I + + ++L L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
WN E+G L ++ +LW+PDV++ N+A
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSA 116
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 38.7 bits (86), Expect = 7e-05
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 239 LQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
L++ W D L WN E+G L + R+W+PDV++ N+A
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSA 131
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 36.7 bits (81), Expect = 3e-04
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 358
N+ E ++ L++ W D L W+ ++G + +++W+PD+VL N A
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 119
>CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein
protein.
Length = 277
Score = 22.2 bits (45), Expect = 6.1
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 266 VVCRSNSFEDLPVSARWTRTH 204
++ R F ++P +A W R H
Sbjct: 220 MLARERLFRNVPAAAGWQRQH 240
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,792
Number of Sequences: 2352
Number of extensions: 7159
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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