Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4h05
(359 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 4e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 46 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 44 4e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 43 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 2e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 3e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 3e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 3e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 3e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 3e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 42 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 5e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 39 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 38 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 1e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.013
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.051
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.12
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.27
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 3.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 3.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 3.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 3.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 3.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 3.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 3.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 3.3
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 5.9
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 5.9
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 20 7.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 20 7.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 47.6 bits (108), Expect = 4e-08
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 62 IASAAECENATSLSLMIDSLLATYDREXPPDSKX----VVNLTLHLRHA---NIRESEST 220
I SA C + D LL+ Y+R P S VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 221 VRILADLQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
+ L+ W D W+ E+G T L V SE +W PD+VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.0 bits (104), Expect = 1e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDREXPPDSKXV--VNLTLHLRHANIRESESTVRILADLQ 244
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVL 346
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 44.4 bits (100), Expect = 4e-07
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Frame = +2
Query: 50 LTCAIASAAECENATSLSLMIDSLLATYDREXPP----DSKXVVNLTLHLRH---ANIRE 208
++C +A + + D LL+ Y+R P + V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 209 SESTVRILADLQMNWIDKXLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 358
T + ++ W D L WN ++G T V SE +W PD+VL N A
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 43.2 bits (97), Expect = 1e-06
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDREXPPDSKXVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKXLS 271
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
WN E+G L V SE +W PD+VL N A
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 2e-06
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDREXPP--DSKXVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKXLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 2e-06
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDREXPP--DSKXVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKXLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 41.5 bits (93), Expect = 3e-06
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +2
Query: 80 CENATSLSLMIDSLLATYDREXPPDSKXVVNLTLHLR-------HANIRESESTVRILAD 238
C + D LL+ Y++ P LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 239 LQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
++ +W D L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.7 bits (91), Expect = 5e-06
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDREXPPD---SKXVVNLTLHLRHAN-IRESESTVRILADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKXLSWNAGEWGCSTWLVSSERLWRPDVVLLN 352
+D+ L++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 38.7 bits (86), Expect = 2e-05
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Frame = +2
Query: 59 AIASAAECENATSLSLMIDSLLATY---DREXPPDSKXVV---NLTLHLRHANIRESEST 220
A+A++ + +++ LL TY +R +S+ +V LTL ++ ++ E
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTL-MQIIDVDEKNQL 69
Query: 221 VRILADLQMNWIDKXLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 358
+ L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 70 LITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.5 bits (83), Expect = 5e-05
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 251 WIDKXLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 358
W D L WNA E+ G V R+WRPD +L N A
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNA 98
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 36.3 bits (80), Expect = 1e-04
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKXLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 358
N+ E ++ L+ W D L W+ ++G + +++W+PD+VL N A
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 119
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.5 bits (63), Expect = 0.013
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +2
Query: 95 SLSLMIDSLLATYDREXPPD----SKXVVNLTLHLRHAN-IRESESTVRILADLQMNWID 259
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 260 KXLSWNAGEWGCSTWLVSSERLWRPDVVLLN 352
LS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.5 bits (58), Expect = 0.051
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDREXPPD---SKXVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 254 IDKXLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 352
D L++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.12
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDREXPPD---SKXVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 254 IDKXLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 352
D L++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.27
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 26 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 130
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLGSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 302 KCCSPIPLRSNSVVCRSNSFE 240
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 317 ERLWRPDVVLLNA 355
+ LW+PD LNA
Sbjct: 69 DSLWQPDPYFLNA 81
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 311 TPAKCCSPIPLRSNSVVCRSNSFED 237
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 20.2 bits (40), Expect = 7.7
Identities = 5/12 (41%), Positives = 8/12 (66%)
Frame = +1
Query: 43 VSPHLCYS*CGR 78
+ PH+C CG+
Sbjct: 37 IKPHICRKICGK 48
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.2 bits (40), Expect = 7.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 304 PSAAAPFPCVP 272
PSA AP P +P
Sbjct: 411 PSAGAPMPPIP 421
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,707
Number of Sequences: 438
Number of extensions: 1871
Number of successful extensions: 52
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8432340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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