BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4g16
(250 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41424 Cluster: Uncharacterized 12.2 kDa protein in EGT... 138 2e-32
UniRef50_O10279 Cluster: Uncharacterized 11.6 kDa protein; n=7; ... 69 2e-11
UniRef50_Q80LK5 Cluster: Putative uncharacterized protein; n=1; ... 51 6e-06
UniRef50_Q0N3Y7 Cluster: Ac19-like protein; n=1; Clanis bilineat... 46 2e-04
UniRef50_Q6PZ56 Cluster: Putative uncharacterized protein; n=1; ... 42 0.002
UniRef50_Q0TT26 Cluster: Putative uncharacterized protein; n=1; ... 35 0.40
UniRef50_UPI00015A5B50 Cluster: CDNA FLJ39660 fis, clone SMINT20... 33 1.2
UniRef50_A2WNA6 Cluster: Putative uncharacterized protein; n=4; ... 33 1.6
UniRef50_Q7RGY3 Cluster: Putative uncharacterized protein PY0421... 32 2.8
UniRef50_Q8D345 Cluster: Tig protein; n=1; Wigglesworthia glossi... 31 3.7
UniRef50_A0E6P6 Cluster: Chromosome undetermined scaffold_8, who... 31 4.9
UniRef50_A4C2Q1 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_Q23PX1 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_Q1ZXJ5 Cluster: Ankyrin repeat-containing protein; n=3;... 30 8.5
UniRef50_A2F7W7 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_Q6C2E0 Cluster: Yarrowia lipolytica chromosome F of str... 30 8.5
>UniRef50_P41424 Cluster: Uncharacterized 12.2 kDa protein in
EGT-IAP1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.2 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 108
Score = 138 bits (335), Expect = 2e-32
Identities = 65/72 (90%), Positives = 69/72 (95%)
Frame = +1
Query: 1 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKML 180
I FVSTLLFKNNLNLM ACNLIN+LINFE+N+FGKSLLL+ FVNFCIANSDGVTIQHKML
Sbjct: 37 IAFVSTLLFKNNLNLMTACNLINSLINFELNMFGKSLLLNGFVNFCIANSDGVTIQHKML 96
Query: 181 TNVLSFLLEKYY 216
TNVLSFLLEKYY
Sbjct: 97 TNVLSFLLEKYY 108
>UniRef50_O10279 Cluster: Uncharacterized 11.6 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 104
Score = 69.3 bits (162), Expect = 2e-11
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = +1
Query: 1 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKML 180
+ FV + + N+L+ NL + ++ E N+F KS L+ VNFC+AN DG T+QH++L
Sbjct: 33 VAFVISAITNNSLSWPTLLNLFDLVVAVERNLFKKSWALNALVNFCVANGDGFTVQHQLL 92
Query: 181 TNVLSFLLEKYY 216
+L L+EKYY
Sbjct: 93 NKILGNLIEKYY 104
>UniRef50_Q80LK5 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 119
Score = 50.8 bits (116), Expect = 6e-06
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 34 NLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVLSFLLEKY 213
NL L N++N +I E V KS++L+ VNF I +SDGV+ Q + T +L + LE Y
Sbjct: 52 NLELTKCKNILNIIIKTEQLVRNKSVVLNLIVNFLIRHSDGVSFQCMLNTKLLGYFLETY 111
Query: 214 Y 216
Y
Sbjct: 112 Y 112
>UniRef50_Q0N3Y7 Cluster: Ac19-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac19-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 125
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 FKNN-LNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVLSFL 201
F NN L L L++++I E +F +SLLL V F I NSDG +Q + T +L +L
Sbjct: 58 FNNNVLALNTIQTLLDSIIQAEQMLFSRSLLLDFCVRFLINNSDGQNLQCLINTQLLDYL 117
Query: 202 LEKY 213
L KY
Sbjct: 118 LNKY 121
>UniRef50_Q6PZ56 Cluster: Putative uncharacterized protein; n=1;
Anticarsia gemmatalis MNPV|Rep: Putative uncharacterized
protein - Anticarsia gemmatalis MNPV
Length = 111
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 1 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTI 165
I F + N + +L + ++ E NVF KSL+L+ VNFCI + DG T+
Sbjct: 21 IAFAIKTVTGNMVTWPTLLHLFDFIVTLERNVFNKSLVLNGLVNFCIVHGDGYTV 75
>UniRef50_Q0TT26 Cluster: Putative uncharacterized protein; n=1;
Clostridium perfringens ATCC 13124|Rep: Putative
uncharacterized protein - Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A)
Length = 164
Score = 34.7 bits (76), Expect = 0.40
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 1 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIAN 147
++FVS LLFK + ++A L N +INF F + L+ FV F N
Sbjct: 100 MSFVSALLFKGFNSELIANWLQNIVINFPFAFFTQLFLIQPFVRFVFRN 148
>UniRef50_UPI00015A5B50 Cluster: CDNA FLJ39660 fis, clone
SMINT2006801.; n=1; Danio rerio|Rep: CDNA FLJ39660 fis,
clone SMINT2006801. - Danio rerio
Length = 993
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 25 FKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVLSF 198
+ N N + LI ++F+++ F K+LLLS+ N I +DG H+ L N++ F
Sbjct: 579 YTQNNNRVGGTKLIVNTVSFKMDHF-KTLLLSQAQNSDIKQNDGCFFWHQKLKNIIIF 635
>UniRef50_A2WNA6 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 1026
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = -3
Query: 140 MQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKSNVLTNV 3
+ L+NL+ L N L S+L+ +L KLH+ + KL++ S + T +
Sbjct: 869 ISSLSNLVRLSLRENYLESELVKILGKLHSLLSLKLYVNSYLGTEL 914
>UniRef50_Q7RGY3 Cluster: Putative uncharacterized protein PY04213;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY04213 - Plasmodium yoelii
yoelii
Length = 635
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 22 LFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVLSFL 201
++KNNLN ++ N +F +++ KS LL N +I K + N+ SFL
Sbjct: 387 VYKNNLNYKISITNENNYFSFNYDIYLKSALLLAIYKIKKFNYHHYSIILKSIQNIQSFL 446
>UniRef50_Q8D345 Cluster: Tig protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Tig protein - Wigglesworthia glossinidia brevipalpis
Length = 435
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -3
Query: 155 PSLLAMQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKS 21
PS+L ++ N LS L N INVL LH++IK KL K+
Sbjct: 301 PSILFENEIKNFLSTNLNCNLNDFSKINVLSLLHSSIKNKLINKT 345
>UniRef50_A0E6P6 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1014
Score = 31.1 bits (67), Expect = 4.9
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 22 LFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVLSFL 201
LF N L ++ C + TL+ F N++ LSK++ + N TIQ K+L + F+
Sbjct: 865 LFTNILPQLIQCLGLLTLLYFAENIYNMLFRLSKYMRL-LKNEK--TIQSKILLVAMKFI 921
Query: 202 L 204
L
Sbjct: 922 L 922
>UniRef50_A4C2Q1 Cluster: Putative uncharacterized protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative uncharacterized
protein - Polaribacter irgensii 23-P
Length = 494
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 22 LFKNNLNLMVACN--LINTLINFEINVFGKSLLLSKFVNFCIAN 147
L+ NL+L + +I L+ F +VFG S+ + KF +FCI +
Sbjct: 44 LYGQNLSLSYFDHPGMIGYLLRFFTDVFGTSVFVVKFADFCITS 87
>UniRef50_Q23PX1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 292
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 4 TFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSL 111
T + L F+NN+N+M NLI T I+ E F +S+
Sbjct: 92 TILILLYFQNNINIMFTNNLIKTKIDEEFIDFERSV 127
>UniRef50_Q1ZXJ5 Cluster: Ankyrin repeat-containing protein; n=3;
Dictyostelium discoideum|Rep: Ankyrin repeat-containing
protein - Dictyostelium discoideum AX4
Length = 1641
Score = 30.3 bits (65), Expect = 8.5
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 31 NNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVLSFLL 204
NNL ++ + N L+N I+ KS+L SK ++F + +TI++ + V F+L
Sbjct: 1501 NNLIILDSINNYKYLVNLNISNISKSILNSK-LHFYFNELEYLTIKNNEILKVFYFIL 1557
>UniRef50_A2F7W7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 4984
Score = 30.3 bits (65), Expect = 8.5
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 1 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKF------VNFCIANSDGVT 162
+ +S +F+ N NLM+A N I EIN+ + LL + +N I + + +T
Sbjct: 2349 MNMISQAVFEAN-NLMMAANSFLEEIKSEINIMEQRKLLERMGRNIFEINTLIQHINSIT 2407
Query: 163 IQHKMLTNVLS 195
I+ M N+++
Sbjct: 2408 IEKNMFDNLMA 2418
>UniRef50_Q6C2E0 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 994
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3
Query: 131 LTNLLSNKLLPNTLISKLINVLIKL 57
LTN L+NK L +TL+S ++NV KL
Sbjct: 438 LTNALTNKDLSDTLVSAVVNVFHKL 462
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,811,449
Number of Sequences: 1657284
Number of extensions: 3183911
Number of successful extensions: 8108
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8106
length of database: 575,637,011
effective HSP length: 61
effective length of database: 474,542,687
effective search space used: 9965396427
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -