Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4g12
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.5
AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical ... 29 3.5
AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 28 6.0
AF000266-7|AAC71173.1| 212|Caenorhabditis elegans Hypothetical ... 28 6.0
Z78013-2|CAB01424.1| 453|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 28 8.0
AC024201-7|AAF36018.2| 321|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Frame = +1
Query: 7 LINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTD---REQKKYNLPPS 177
L N +I + A S+K+ TTT+ + A + TQ+VF+D+PG V+ R+ K S
Sbjct: 49 LTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVSTSHVRQTMKKTSATS 108
Query: 178 ---MLGSCHKSLRCADVVGVVHDASCKYIKESLHKDVVEMLNSVQDMPSFLIINKVDKLR 348
+L ++L+ A V VV D++ +H V+ ML+ +PS L++NK+D +
Sbjct: 109 GDRVLQDPERALQRAQHVLVVQDSTAP--GAYIHHRVLHMLHRYSHVPSILVMNKIDLVM 166
Query: 349 SKKQLLTLVRNLTNGFIAGN 408
+ LL LV LTNG ++ N
Sbjct: 167 RRSDLLPLVEILTNGQLSDN 186
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/98 (25%), Positives = 57/98 (58%)
Frame = +1
Query: 448 GFSHFSDVFMVSALNGDGVSDIREYLVNNAKPGKFHYSTEEWTDQTPKSVIEDAVRAKFL 627
G+S F VF VS+LNG+G+ ++R++L++ + G++ T ++ + + D++RA L
Sbjct: 249 GWSGFERVFFVSSLNGEGIDELRDHLMSISPQGEWKMQDGMPTGESAQQLCIDSIRAAVL 308
Query: 628 DFLHQEIPYNLKVKLDYYEEIDNEDKIICSVSVECPSE 741
D ++ Y +++++ +EE +I+ + + P +
Sbjct: 309 DTTPSDVAYTVQIRISEWEEQGEVLQIVGEIRCQKPRD 346
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Frame = +1
Query: 7 LINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTD---REQKKYNLPPS 177
L N +I + A S+K+ TTT+ + A + TQ+VF+D+PG V+ R+ K S
Sbjct: 49 LTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVSTSHVRQTMKKTSATS 108
Query: 178 ---MLGSCHKSLRCADVVGVVHDASCKYIKESLHKDVVEMLNSVQDMPSFLIINKVDKLR 348
+L ++L+ A V VV D++ +H V+ ML+ +PS L++NK+D +
Sbjct: 109 GDRVLQDPERALQRAQHVLVVQDSTAP--GAYIHHRVLHMLHRYSHVPSILVMNKIDLVM 166
Query: 349 SKKQLLTLVRNLTNGFIAGN 408
+ LL LV LTNG ++ N
Sbjct: 167 RRSDLLPLVEILTNGQLSDN 186
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/98 (25%), Positives = 57/98 (58%)
Frame = +1
Query: 448 GFSHFSDVFMVSALNGDGVSDIREYLVNNAKPGKFHYSTEEWTDQTPKSVIEDAVRAKFL 627
G+S F VF VS+LNG+G+ ++R++L++ + G++ T ++ + + D++RA L
Sbjct: 249 GWSGFERVFFVSSLNGEGIDELRDHLMSISPQGEWKMQDGMPTGESAQQLCIDSIRAAVL 308
Query: 628 DFLHQEIPYNLKVKLDYYEEIDNEDKIICSVSVECPSE 741
D ++ Y +++++ +EE +I+ + + P +
Sbjct: 309 DTTPSDVAYTVQIRISEWEEQGEVLQIVGEIRCQKPRD 346
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 139 TDREQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIKESLHKDVVEMLNSVQDMPSF 318
TDR ++ + +CH LR D V +VH I +S +K V NS P
Sbjct: 91 TDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRWNQIPDSHNKSVPHFSNS-NFAPMV 149
Query: 319 LIINKVDKLR 348
L ++ +++R
Sbjct: 150 LYLDSEEEVR 159
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 139 TDREQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIKESLHKDVVEMLNSVQDMPSF 318
TDR ++ + +CH LR D V +VH I +S +K V NS P
Sbjct: 91 TDRRRRLQGVARDCGHACHLRLRSDDAVYIVHLHRWNQIPDSHNKSVPHFSNS-NFAPMV 149
Query: 319 LIINKVDKLR 348
L ++ +++R
Sbjct: 150 LYLDSEEEVR 159
>AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical
protein Y46H3D.7 protein.
Length = 333
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 559 STEEWTDQTPKSVIEDAVRA--KFLDFLHQEIPYNLKVKLDYYEEIDNEDKIICSVSVE 729
S ++ T + K+++E+ A LD L +E N + KL Y+EE+D+ + S+ VE
Sbjct: 81 SKKQKTSSSEKTILEELNEAYQNLLD-LRKETFRNQEAKLTYFEEMDDVCSVDLSLVVE 138
>AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.3 protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 527 TRYSLISETPSPFKADTINTSEK*LKPLSCLLGFVGPGIGFPAINPLVRFLTKVN---NC 357
T+ S ISETPS +I+++ LSC +GF IG + L T+ N NC
Sbjct: 68 TKTSTISETPSTTSLVSISSTHAPSNNLSCHIGF--ELIGGKCLQLLTGVGTRANGNHNC 125
Query: 356 FFDLNLSTLFMIR 318
+ S LF IR
Sbjct: 126 WLH-GGSKLFSIR 137
>AF000266-7|AAC71173.1| 212|Caenorhabditis elegans Hypothetical
protein W08F4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 619 KFLDFLHQEIPYNLKVKLDYYEEIDNEDKIICSV 720
KFLD +H+ + N ++ ++ ++ E K ICS+
Sbjct: 17 KFLDHIHEVLHQNRQIHINLENGMNEEIKTICSL 50
>Z78013-2|CAB01424.1| 453|Caenorhabditis elegans Hypothetical
protein F15B9.6 protein.
Length = 453
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +1
Query: 151 QKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIKESLHKDVVE 285
Q+ YNL CHKS VV H SCK E L K+ V+
Sbjct: 225 QRGYNLCDKTARECHKS-----VVLSSHQESCKAFSEKLLKNRVD 264
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +1
Query: 496 DGVSDIREYLVNNAKPGKFHYSTEEWTDQTPKSVIEDAVRAKFLDFLHQEIPYNLKVKLD 675
+G S + Y V + S E W + T + D F + +++ ++KVKLD
Sbjct: 336 EGRSQLSRYTVEHED---MELSPESWDNATQTPYVLDLKTRTFFTYENEK---SIKVKLD 389
Query: 676 YYEEIDNEDKIICSVSVE 729
Y ++D I SV ++
Sbjct: 390 YVNKMDLGGVWIWSVDMD 407
>AC024201-7|AAF36018.2| 321|Caenorhabditis elegans Hypothetical
protein Y71F9B.2 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 250 YIKESLHKDVVEMLNSVQDMPSFLIINKVDKLRSKKQLL 366
YI LHK V+E++ QDM + N+ L S LL
Sbjct: 119 YISGRLHKPVLEVIKPRQDMCDLVTENRRSALHSSLLLL 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,347,395
Number of Sequences: 27780
Number of extensions: 342024
Number of successful extensions: 939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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