Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4g09
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    29   0.053
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    29   0.053
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   6.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 0.053
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -3

Query: 370 NFRRRV-LISTQHLITS*ELQTIYSYFIL--LA*LFVQGIFCGK*LFVSVGVWVKNYAMP 200
           NF  +V +I  + L+T  E+QTI+S  +L  +A  FV GIFC     +   ++     +P
Sbjct: 215 NFLSQVEIIHNEILVTHNEIQTIFSVPLLMKIASQFV-GIFCSLYFCIFGYIYDDEMVVP 273

Query: 199 LRFH 188
             FH
Sbjct: 274 QNFH 277


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 0.053
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -3

Query: 370 NFRRRV-LISTQHLITS*ELQTIYSYFIL--LA*LFVQGIFCGK*LFVSVGVWVKNYAMP 200
           NF  +V +I  + L+T  E+QTI+S  +L  +A  FV GIFC     +   ++     +P
Sbjct: 40  NFLSQVEIIHNEILVTHNEIQTIFSVPLLMKIASQFV-GIFCSLYFCIFGYIYDDEMVVP 98

Query: 199 LRFH 188
             FH
Sbjct: 99  QNFH 102


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 483 YYVHLYAICVFVYTLLNQLTFRC 551
           YY+HL   C F+   ++ L   C
Sbjct: 262 YYMHLLFCCAFIIFTMHLLFLLC 284



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 300 HILFYLRDYLYRVYFAGSSYLF 235
           H+LFY    ++ V+F   +Y F
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYF 103


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -3

Query: 715 DSQEVLPPVYAFLRRCSDCDTKYSCD 638
           ++ +  P  Y F      CD  Y C+
Sbjct: 34  EATDQCPEKYGFFADAEQCDKYYECN 59


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 490 YIYMLYVCLFIHY 528
           Y+  LY+ LF+HY
Sbjct: 4   YLIPLYLFLFVHY 16


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -1

Query: 168 AVFMRRLLLSVEIGRYSICEYVSLNAYWATCVVFIMSDPNYIRHPLIFANER 13
           +VF+R   L  +   Y I    S N    TC +F+    +   +P +F N++
Sbjct: 469 SVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQK 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,393
Number of Sequences: 336
Number of extensions: 4435
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)