Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4g09
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160906-1|AAD46846.1|  505|Drosophila melanogaster BcDNA.LD0279...    30   3.9  
AE013599-2704|AAF57684.1|  505|Drosophila melanogaster CG5519-PA...    30   3.9  
AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p pro...    29   6.8  
AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA...    29   6.8  
AE013599-3436|AAF46879.2|  129|Drosophila melanogaster CG13510-P...    29   9.0  

>AF160906-1|AAD46846.1|  505|Drosophila melanogaster BcDNA.LD02793
           protein.
          Length = 505

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 377 CHQFPQTGTYFYPTFDHELRTSND 306
           CH+ P TG   +PT D+ L TS+D
Sbjct: 305 CHEGPVTGLSLHPTGDYLLSTSSD 328


>AE013599-2704|AAF57684.1|  505|Drosophila melanogaster CG5519-PA
           protein.
          Length = 505

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 377 CHQFPQTGTYFYPTFDHELRTSND 306
           CH+ P TG   +PT D+ L TS+D
Sbjct: 305 CHEGPVTGLSLHPTGDYLLSTSSD 328


>AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p
           protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +2

Query: 53  GSDIMKTTQVAQYALRLTYSQMEYRPISTLRSNRLMNTAVHLKTSMKPQRHCIILH 220
           G+ +MK      +AL+  + Q+  R I T +   L ++AVH  T ++ +R  ++ +
Sbjct: 62  GAPVMKRYYCQLHALQNRFPQLADRGIFTFKWKDLYHSAVHEVTDLRFERAAVLFN 117


>AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA
           protein.
          Length = 1833

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +2

Query: 53  GSDIMKTTQVAQYALRLTYSQMEYRPISTLRSNRLMNTAVHLKTSMKPQRHCIILH 220
           G+ +MK      +AL+  + Q+  R I T +   L ++AVH  T ++ +R  ++ +
Sbjct: 62  GAPVMKRYYCQLHALQNRFPQLADRGIFTFKWKDLYHSAVHEVTDLRFERAAVLFN 117


>AE013599-3436|AAF46879.2|  129|Drosophila melanogaster CG13510-PA
           protein.
          Length = 129

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 482 ILCTFICYMCVCL 520
           ILC FIC+ CVCL
Sbjct: 91  ILCLFICWPCVCL 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,140,612
Number of Sequences: 53049
Number of extensions: 724645
Number of successful extensions: 1779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)