Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4g09
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               22   5.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.4  

>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 299 IFYFTCVIICTGYILREVAICFSRSVGEELC 207
           I+ F  VI+ T Y +  V  C  ++    LC
Sbjct: 8   IYLFLSVILITSYFVTPVMPCNCKAPETALC 38


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +1

Query: 40  SYIIWIGHNENDTSCPVRVKTHIFAD 117
           +Y+  + +NE++  CP  V   I+ +
Sbjct: 548 TYLFDLDYNESEEQCPYTVDAAIYGN 573


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 629 GAPITTVLSVTIGTTS 676
           GAP TT+ ++T  TT+
Sbjct: 652 GAPATTITTITTTTTT 667


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 332 DHELRTSNDILIFYF 288
           DH L  SND   F+F
Sbjct: 275 DHTLEKSNDYYAFHF 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,763
Number of Sequences: 438
Number of extensions: 4990
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)