Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4g02
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    26   0.29 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.5  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 242 YLIRFHSYFVKFELYYLDTMAYQTLLQEYMLI 337
           Y + F  ++ +F +Y+L     + LLQ+Y  +
Sbjct: 144 YAVEFFQFYAQFIVYFLIYAVLEMLLQKYKTV 175


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 307 SNPSPRVYANTTSHQ 351
           S PSPRVY N   +Q
Sbjct: 418 STPSPRVYGNVNENQ 432



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 418 LKR*Y*IKLNSQSCDNTSRG 359
           +K+ Y   +NSQSC  TS G
Sbjct: 364 MKKRYSALINSQSCPITSSG 383


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = -3

Query: 310 LIRHCIQIIQFKLHEI*MKTNEITRLKKCLGSTLLG 203
           ++++C+    F L+ +  K+N+++R  K   + LLG
Sbjct: 279 IVKNCLSYC-FNLYHLASKSNQLSREAKVTKTVLLG 313


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = -3

Query: 310 LIRHCIQIIQFKLHEI*MKTNEITRLKKCLGSTLLG 203
           ++++C+    F L+ +  K+N+++R  K   + LLG
Sbjct: 279 IVKNCLSYC-FNLYHLASKSNQLSREAKVTKTVLLG 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,480
Number of Sequences: 336
Number of extensions: 3962
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)