Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4g01
         (220 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   0.87 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   0.87 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   0.87 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    20   3.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   3.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   3.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   4.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 0.87
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 87  NIIRQLXEALNDLHKHNFIHND 22
           N++ +  E + D H+H+F+H +
Sbjct: 113 NMLLRHHEEVADGHQHHFLHEN 134


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 0.87
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 87  NIIRQLXEALNDLHKHNFIHND 22
           N++ +  E + D H+H+F+H +
Sbjct: 113 NMLLRHHEEVADGHQHHFLHEN 134


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 0.87
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 87  NIIRQLXEALNDLHKHNFIHND 22
           N++ +  E + D H+H+F+H +
Sbjct: 113 NMLLRHHEEVADGHQHHFLHEN 134


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 2.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 166 RDGLHRLSGFI*NATN*RRAF 104
           RDG HR S  + ++ N RR F
Sbjct: 258 RDGSHRFSTMV-SSANRRREF 277


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 210 IKIYFNH 190
           +KIYFNH
Sbjct: 127 VKIYFNH 133


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 210 IKIYFNH 190
           +KIYFNH
Sbjct: 127 VKIYFNH 133


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 210 IKIYFNH 190
           +KIYFNH
Sbjct: 127 VKIYFNH 133


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.4 bits (38), Expect = 4.6
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -2

Query: 180 NNQVIVMDYIDCPDLFETLQIKG 112
           NN +++ ++ D P+   + +I G
Sbjct: 409 NNSILIKNFNDSPESNRSNEIDG 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,200
Number of Sequences: 336
Number of extensions: 399
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2901555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)