Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4g01
         (220 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    27   0.035
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    27   0.035
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.11 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   0.56 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   1.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   4.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   9.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.6 bits (56), Expect = 0.035
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 120 IKGELSXQLVSNIIRQLXEALNDLHKHNFIHNDIKLXNV 4
           I+  LS      I   + E +  LH    +H D+KL NV
Sbjct: 690 IRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNV 728


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 26.6 bits (56), Expect = 0.035
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 120 IKGELSXQLVSNIIRQLXEALNDLHKHNFIHNDIKLXNV 4
           I+  LS      I   + E +  LH    +H D+KL NV
Sbjct: 728 IRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNV 766


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.0 bits (52), Expect = 0.11
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -2

Query: 141 DLFETLQIKGELSXQLVSNIIRQLXEALNDLHKHNFIHNDIKLXNV 4
           +L+  L+ KG             + EA + LH  N I+ D+K  N+
Sbjct: 452 ELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENL 497


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 0.56
 Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 180 NNQVIVMDYIDCPDLFETLQIK-GELSXQLVSNIIRQLXEALNDLHKHNFIHNDIKLXNV 4
           N  +I+ ++++   L   L+   G+     +  ++R +   +  L + N++H D+   NV
Sbjct: 707 NPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNV 766


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 117 KGELSXQLVSNIIRQLXEALND 52
           KG++   LV NII +L  AL++
Sbjct: 593 KGDMEAFLVKNIIPKLQIALSE 614


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 201  YFNHGFINNQVIVMDYI 151
            YF+ G +   ++V DY+
Sbjct: 979  YFSQGGVIESIMVSDYL 995


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 190 RFH*QPSDRDGLHRLSGF 137
           R H  PS R+GL   S F
Sbjct: 32  RLHDNPSLREGLAGASTF 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,630
Number of Sequences: 438
Number of extensions: 386
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)