Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4f22
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   4.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 354 TSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVP 458
           ++T+ +S+     + PT   +S SC   P+M   P
Sbjct: 10  STTMATSSNAMSPMTPTYSMNSMSCVSMPSMNCSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 401  DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 529
            D ++  +++C  +N+      A+Y Q  GK L SD+  D   H
Sbjct: 1818 DPKSEFKVVCYFTNW------AWYRQGVGKYLPSDIDPDLCTH 1854


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 66  LRFFCITATHPTTQDRREFRN 4
           +R++C TAT    Q+  EF N
Sbjct: 291 MRWYCQTATMEEKQELYEFSN 311


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 606 PMPKHLPPLVKVNGEPTNQSSTPSLSL 686
           P PK   PL+ V  +P  Q+    L +
Sbjct: 477 PNPKEKTPLINVTWKPVTQNEMNFLDI 503


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 588 MKAQPKPMPKHLPPLVKVNGEP 653
           +K  P P P H PP   V   P
Sbjct: 733 VKLPPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 588 MKAQPKPMPKHLPPLVKVNGEP 653
           +K  P P P H PP   V   P
Sbjct: 625 VKLPPPPHPHHQPPRNPVGTNP 646


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 597 QPKPMPKHLPPLVKVNGEPTNQSSTPSLS 683
           +P P+ +    L   NG PT+ S   +LS
Sbjct: 189 RPLPLDQKARDLSPRNGSPTDHSPVLNLS 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,879
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)