Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4f22
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 130 8e-31
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 97 9e-21
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 95 6e-20
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 88 7e-18
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 60 1e-09
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 60 2e-09
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 29 2.8
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 29 3.6
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 29 4.8
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 4.8
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24) 29 4.8
SB_13251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 28 6.4
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 28 8.4
SB_44630| Best HMM Match : HECT (HMM E-Value=0) 28 8.4
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 130 bits (315), Expect = 8e-31
Identities = 76/183 (41%), Positives = 103/183 (56%)
Frame = +2
Query: 152 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 331
TL A G D KA++ +LC R QR I+ +KT +G+DLI +LKSE+ G E+ ++
Sbjct: 92 TLDIASNKPGCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVI 151
Query: 332 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 511
ALMTP + A L A+ G+GTDE +IE+L T +N I I Y L+ + LE D+
Sbjct: 152 ALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIA 211
Query: 512 GDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRS 691
GDTSG FK+ +SLC A +G +WGTDES FNSIL +RS
Sbjct: 212 GDTSGKFKKFLISLCNALYKAGEG-------------------RWGTDESKFNSILASRS 252
Query: 692 YQQ 700
+ Q
Sbjct: 253 FDQ 255
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 97.5 bits (232), Expect = 9e-21
Identities = 49/151 (32%), Positives = 80/151 (52%)
Frame = +2
Query: 239 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAII 418
++ + + Y KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +I
Sbjct: 477 KLNDEYNKRYKKDLVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLI 536
Query: 419 EILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXX 598
EILCT SN I+ I Y + YG+SL D+K +TSG F+ L +L +RDE+ ++
Sbjct: 537 EILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLETLLKGSRDESTDVNKEL 596
Query: 599 XXXXXXXXXXXXXXQWGTDESIFNSILITRS 691
+WGTDE F +IL RS
Sbjct: 597 VTKDAAALVSAGVARWGTDEDQFITILSQRS 627
Score = 64.9 bits (151), Expect = 6e-11
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +2
Query: 152 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 331
+L AMKG GT E +I++LC R + EI + + YG+ L ++KSE +G+ EN++
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLE 579
Query: 332 ALM-------TPL-PHFYAKELHDAVS-GI---GTDEEAIIEILCTLSNYGIRTISAFYE 475
L+ T + K+ VS G+ GTDE+ I IL S+ ++ + A Y+
Sbjct: 580 TLLKGSRDESTDVNKELVTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYK 639
Query: 476 QLY-GKSLESDLKGDTSGHFKRLCVSLCMANRDENQ 580
L G SL ++ + G + + L +D +Q
Sbjct: 640 TLSGGVSLADTVRDEMKGDLRDALLVLISYGQDPSQ 675
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 185 DEKAIIDVLCRRGIVQRL--EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHF 358
D+K I +++ + + ++ ++ + +K Y +DL L +L +L + A++ P
Sbjct: 17 DKKKIKELVMKAAVDKKKLKKLGDDYKKQYKQDLTDALDGKLEEDLHEAVAAMLLPGNEA 76
Query: 359 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 538
A+ L+ A+ I + +E Y++ YG SLE D+K +TSG F+
Sbjct: 77 DARTLYFAMKNIDSIKEE-------------------YQKKYGCSLEDDVKEETSGDFED 117
Query: 539 LCVSL 553
L V+L
Sbjct: 118 LLVAL 122
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 242 IAETFKTNYGKDLISELKSELTGNLENVIVALMT 343
I E ++ YG L ++K E +G+ E+++VALM+
Sbjct: 91 IKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMS 124
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 94.7 bits (225), Expect = 6e-20
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +2
Query: 182 TDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 361
T+E +I +L R QR+EI + +KT YGKDL+++LKSEL+GNLE ++A+M P +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61
Query: 362 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 454
AK L + G GTDEE +I+ILCT SN G R
Sbjct: 62 AKCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 39.1 bits (87), Expect(2) = 8e-08
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2
Query: 539 LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQ 700
LC NRD N +D +WGTDES FN +L +RS+ Q
Sbjct: 83 LCTRSNQGNRDTNMTVDMAKATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQ 136
Score = 35.1 bits (77), Expect(2) = 8e-08
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 398 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 553
T+E +I IL SN I Y+ +YGK L +DLK + SG+ + +++
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAM 53
Score = 35.1 bits (77), Expect = 0.056
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRR 220
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 87.8 bits (208), Expect = 7e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 334
L+KAMKGFG+DE+AII+VL + QRL IA++FK Y KDL++ELKSEL+G E+ IVA
Sbjct: 311 LKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVA 370
Query: 335 LMTPLPHFYAKELHDAVSGIGTDEEAII 418
L+ P A LH A+ + I+
Sbjct: 371 LLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVL-CRRGIVQRLE-IAETFKTNYGKDLISELKSELTGNLENVI 328
L+KA++ +D+K +V+ C +L+ +++ + Y KDL+ +L ++ ++ +
Sbjct: 52 LQKAIEK--SDKKTATEVIVCNASDEGKLKKLSDEYNKRYEKDLVEQLDGKVADDVHEAV 109
Query: 329 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 448
+L+ P + L+ A+ G+GT E +IE LCT SN G
Sbjct: 110 TSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTG 149
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Frame = +2
Query: 362 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 541
A++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + SG F+
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDA 367
Query: 542 CVSLCM------ANR----------DENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNS 673
V+L + AN ++ ++ +WGTDES+F
Sbjct: 368 IVALLLPPEQLDANALHGAMQAKRVSADEIVNEDQAYEDAKNLYEAGEKKWGTDESVFTK 427
Query: 674 ILITRS 691
IL RS
Sbjct: 428 ILTCRS 433
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 152 TLRKAMKGFGTDEKAIIDVLCRR 220
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/132 (27%), Positives = 66/132 (50%)
Frame = +2
Query: 170 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 349
K +GTDE VL R Q + +D+++ + E++G+L+ + P
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGLQCARNPA 86
Query: 350 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 529
+F A L ++ G GTD+ +I ++ + S + I A + Q Y K++ ++GD SG
Sbjct: 87 EYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGD 145
Query: 530 FKRLCVSLCMAN 565
+K+L ++L N
Sbjct: 146 YKKLLMALPSPN 157
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 334
L K+MKG GTD+ +I V+ R V +EI +F Y K + ++ + +G+ + +++A
Sbjct: 93 LWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGDYKKLLMA 152
Query: 335 LMTP 346
L +P
Sbjct: 153 LPSP 156
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 563 NRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQ 700
NRD N +D +WGTDES FN +L +RS+ Q
Sbjct: 2 NRDTNMTVDMAKATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQ 47
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Frame = +2
Query: 155 LRKAMKGFGTD--EKAIIDVLCR----RGIVQRLEIAETFKTNYGKDLISELKSELTGNL 316
L +A++G ++ + AIID+L R R + RL+ + +K + +D++ L+ L ++
Sbjct: 353 LHQAIQGMVSEGNKDAIIDILARNCDERSKLDRLK--DKYKDQHDQDILEALQPHLGDDV 410
Query: 317 ENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 442
++ + + + F AK LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 411 KDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 185 DEKAIIDVLCRRGIVQRL-EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 361
D++ I+ +L R ++ ++ + +K Y KDL ELKS L + + +L
Sbjct: 21 DKERIMGILGRTSEKDKMNKLEDKYKDLYKKDLNEELKSVLDEEIMKALESLAEEAAMKD 80
Query: 362 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 454
AK L++A G GTDE+A+I ILCT SN G R
Sbjct: 81 AKTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 152 TLRKAMKGFGTDEKAIIDVLCRR 220
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/114 (21%), Positives = 39/114 (34%)
Frame = +2
Query: 359 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 538
Y K+L++ + + DEE + + ++ YE G + D
Sbjct: 49 YKKDLNEELKSV-LDEEIMKALESLAEEAAMKDAKTLYEATKGFGTDEDAL------ISI 101
Query: 539 LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQ 700
LC RDE++ D WGTDE F + RS+ Q
Sbjct: 102 LCTRSNKGQRDESKEADIHLAKKDAKDLMEAGVASWGTDEGAFIRVFTQRSFTQ 155
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 34.3 bits (75), Expect = 0.097
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 IVALMTPLPHFYAK-ELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 493
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 494 LESDLKGDTSGHFKRLC 544
+E+ LKG +S H R C
Sbjct: 597 VEA-LKGKSSWH--RFC 610
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/98 (23%), Positives = 35/98 (35%)
Frame = +3
Query: 381 LSQELEPTKKPSSRSCARFPTMVSVPYPLFTNNCTARAWNRT*KATRRDTSRDCACRCAW 560
+S + +P K S T+V V + + RD RC
Sbjct: 1695 ISVQTKPKKSVSDDPMLNLATLVDVAAAATKVEVARERREAEERELQERVERDSPVRCTA 1754
Query: 561 PTGTKTRASMKAQPKPMPKHLPPLVKVNGEPTNQSSTP 674
T T R + P P PPL+ + G T+Q ++P
Sbjct: 1755 VTSTSPRYGITTGLVPKP---PPLMPITGTKTSQEASP 1789
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 349 APLLR*GAPRCCLRNWNRRRSHHRDP 426
+P L PRCC +N N R H DP
Sbjct: 138 SPFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +2
Query: 218 RGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVS--- 388
R +V RL+I +T + K+ L I++L+T Y + L +A+
Sbjct: 81 RNLVSRLKITFAGETLQDTNRYDVFKTYEELYLSKTILSLLTDHGELYPRALSEALLFEI 140
Query: 389 GIGTDEEAIIEILCTLSNYGIRTISAFYEQL 481
+ T ++ ++ T +YGI+ + YE L
Sbjct: 141 TLATVDQVVVGSDATKLSYGIKNLELEYENL 171
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +2
Query: 197 IIDVLCRRGIVQRLEIAETFKTNYGKD--LISELKSELTGNLENVIVALMTPLPHFYAKE 370
++ +L + I + L+ ++NYG+ L S+ S L +++++ + + +
Sbjct: 149 VVPILSFKDIQEPLDYVS--ESNYGQQVSLFSKNPSSLAPLIDSLVNQVCRVNINTKCQR 206
Query: 371 LHDAVSGIGTDEEAI--IEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 538
D + +G + A+ + + L + IRT+ AF + SDL + S +F R
Sbjct: 207 GPDVLPFVGRKDSAVSTLSVYDALRTFSIRTLVAFRSNAINDKILSDLLENESSNFLR 264
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +2
Query: 200 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 364
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 365 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 496
K + + VSG GTD + + I T+S ISA L+ K++
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAV 627
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +3
Query: 285 ANSRVNSPETWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYP 464
A N P T S +P T+ + ++ L+PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 465 LFTNNCTARA 494
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 519 RRDTSRDCACRCAWPTGTKTRASMKA---QPKPMPKHLPPLVKVNGEPTNQSSTPSLSLA 689
RR+ D A P+ T+T+ ++ P+P+P P P STP+L LA
Sbjct: 11 RRNIFSDAFNSRARPSSTRTKLAVPPIPHGPRPLPPLREPPTPAPTPPPALPSTPTLPLA 70
Query: 690 P 692
P
Sbjct: 71 P 71
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +2
Query: 200 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 364
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 435 IENACRAGPLPNMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 494
Query: 365 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 499
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 495 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 539
>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 345 PCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYPLFTNNC 482
P P STL S + +P S+ SC ++ P+PL T +C
Sbjct: 27 PFPLSTL-SCVQYQERYKPPFPLSALSCVQYQERYKPPFPLSTLSC 71
>SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24)
Length = 285
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +2
Query: 200 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 364
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 171 IENACRAGPLANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 230
Query: 365 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 499
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 231 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 275
>SB_13251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 345 PCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYPLFTNNC 482
P P STL S + +P S+ SC ++ P+PL T +C
Sbjct: 44 PFPLSTL-SCVQYQERYKPPFPLSALSCVQYQERYKPPFPLSTLSC 88
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 345 PCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYPLFTNNC 482
P P STL S + +P S+ SC ++ P+PL T +C
Sbjct: 80 PFPLSTL-SCVQYQERYKPPFPLSALSCVQYQERYKPPFPLSTLSC 124
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 585 SMKAQPKPMPKHLPPL-VKVNGEPTNQSSTPSLSL 686
SM+ +P P PK +PP + + P STP SL
Sbjct: 170 SMETEPTPPPKEMPPQPAEESRTPPGSRSTPEPSL 204
>SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 561 PTGTKTRASMKAQPKPMPKHLPPLVKVNGEPTNQSSTPSLSLA 689
P+G S A+P + +LP +V + G + + +P+LSL+
Sbjct: 245 PSGNPLSFSFSARPSSL-SNLPTMVNIRGHMPHPNPSPALSLS 286
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 359 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 499
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 47 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 93
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 588 MKAQPKPMPKHLPPLVKVNGEPTNQSSTPSLSLAPI 695
M P+P PKH P K+ PT PS SL P+
Sbjct: 71 MTPTPEPSPKHRSPSPKLTKTPT----PPSWSLTPL 102
>SB_44630| Best HMM Match : HECT (HMM E-Value=0)
Length = 1003
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 355 VGQGSHQCDDDIFQVSGEFTLEFANQVLAIVSLE 254
VG GS C + F SGE F Q+ AIVS+E
Sbjct: 138 VGCGSDSCTNR-FCYSGELASSFTPQLAAIVSIE 170
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,420,711
Number of Sequences: 59808
Number of extensions: 420579
Number of successful extensions: 1455
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -