Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4f17
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   1.9  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    24   4.3  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.3  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   7.5  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +1

Query: 202 FGIIVCVHYLRNLMNMMVQYVEFASI--FNSLFSCRAEMTTRLRSGTTNKEDVYSHCSVI 375
           F +I  V YLR LMN + Q  E  S+  +         + + + S       +Y   +++
Sbjct: 104 FSVIGTVKYLRYLMNSITQQSELFSLGRYEMFLVMSPLLFSHIASTKDAGYKLYRGGTIV 163

Query: 376 WIIYVQH 396
           + +Y +H
Sbjct: 164 FQLYFEH 170


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 566 PVCKXLGFLWTEKKECCSRTCW 631
           P C   G      K+CCS  C+
Sbjct: 229 PKCTSNGLYCVHNKDCCSGACY 250



 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 572 CKXLGFLWTEKKECCSRTC 628
           CK +G   T  + CCS  C
Sbjct: 308 CKAIGDSCTRHENCCSSNC 326



 Score = 23.0 bits (47), Expect = 9.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 569 VCKXLGFLWTEKKECCSRTC 628
           +C  +G       ECCS++C
Sbjct: 166 MCAKIGEYCLTSSECCSKSC 185


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 171  LASLHNGVIQLWDYRMCTLLEKFDE 245
            + ++ + VI  W+YR C L E  ++
Sbjct: 991  MVAIQDRVIATWNYRRCILREDVED 1015


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 653 STSNRSFWTG*CCCEARLGGPR 718
           +T  R F+TG     AR GGPR
Sbjct: 213 ATVERPFFTGRMHTAARYGGPR 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,795
Number of Sequences: 2352
Number of extensions: 16430
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)