Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4f08
         (826 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA...    31   2.5  

>AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA
           protein.
          Length = 564

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = -3

Query: 551 RFTNSLPLTHWPRPSLSRKHSSLSLPQRSINSSPTSHCCLIPHMSKS---SLPTVSVFMD 381
           RF N +P T W     +    SL  PQ  + S  +  C  I   +KS     P V V++ 
Sbjct: 68  RFANPVPETSWGDEVFNATSDSLVCPQPGVVSLMSEDCLKINVFTKSFEDKFP-VMVYIH 126

Query: 380 SSTRVLGS 357
               VLGS
Sbjct: 127 GGANVLGS 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,709,522
Number of Sequences: 53049
Number of extensions: 787533
Number of successful extensions: 2796
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2796
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)