Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4e23
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 78 7e-15
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 38 0.009
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 34 0.087
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 31 0.61
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 29 3.3
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 29 3.3
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 29 3.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.7
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 28 7.6
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 28 7.6
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 28 7.6
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.6
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 77.8 bits (183), Expect = 7e-15
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Frame = +3
Query: 159 RRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQV-ASIHFTNPL 335
R S H + L R QS+ S+ Q P + A T L +P LV + ++ +S +F
Sbjct: 5 RAVSVH-RFLSRAARQSVTAASSAQ-PSLQAK---TSLLEP--LVQNVRITSSANFHMSA 57
Query: 336 LVEQDVTT---PSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 506
+ DV T P+F +S+SEGD++ K+ GD V DE+V EIETDKT++ V AP G I
Sbjct: 58 VRMSDVITVEGPAFAESISEGDIRWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIV 117
Query: 507 ELYVKDGETVKAGQKLFRLE 566
E V+DG V A QKL++L+
Sbjct: 118 EFLVEDGAKVTAKQKLYKLQ 137
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 408 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEITG 575
K GD+++ + V E+++DK A+ + G++K+LY + + GQ L +EI G
Sbjct: 53 KEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYHEVDGMARVGQALIDVEIEG 108
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +3
Query: 204 QSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVS 383
QS R ST K + P A + ++ + L V P+ ++
Sbjct: 31 QSSRALSTGAAAKSSGLVGQVARQYPNAAAFSIKQVRLYSSGNLPKHNRVALPALSPTME 90
Query: 384 EGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 527
G V KK GD ++ +++ EIETDK + P G + ++ +++G
Sbjct: 91 LGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEG 139
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 34.3 bits (75), Expect = 0.087
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = -3
Query: 583 GASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 404
G++ ++ + F +L S S + TP P ++G++ + S TTS +T S + +
Sbjct: 370 GSTASTTSGSLFSTSLGSSQSPGSSVSTTPGPSTISGISQSTTSGPTTTSEPSTTSGSTV 429
Query: 403 SNLTSPSETESGKLGVVTSCSTSRG 329
S+ + PS T + T+ ST+ G
Sbjct: 430 SDTSGPSTTSGPSTTLGTTQSTTSG 454
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 396 KLDKKVGDSVAADEVV-LEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEIT 572
K+D+KV D++ D VV ++++ +PVM G K+ G VKA ++ ++I
Sbjct: 235 KVDQKVVDAIGKDMVVAVQVDVADNGMPVMKVLEGKPKDKETPVGIIVKANDQVQFVQIV 294
Query: 573 G 575
G
Sbjct: 295 G 295
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 319
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 332 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 387
Query: 320 LHESPA 337
+HE PA
Sbjct: 388 MHEIPA 393
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 319
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 100 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 155
Query: 320 LHESPA 337
+HE PA
Sbjct: 156 MHEIPA 161
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 319
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 332 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 387
Query: 320 LHESPA 337
+HE PA
Sbjct: 388 MHEIPA 393
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 538 LTVSPSLTYNSLMTPWPGAMTGMAVLSVSISR--TTSSAATLSPTFLSNLTSPSETES 371
+T SPS + S T P + + SVS S T SS AT S +S L+S T S
Sbjct: 1977 ITPSPSQSTESTQTSLPSSSPSPSTHSVSSSEGTTMSSGATTSGDKMSFLSSTGTTVS 2034
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 221 VNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPA 337
V+ S + TL + P SS P SSS P +SPA
Sbjct: 566 VSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA 604
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +3
Query: 222 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 380
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 381 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 488
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +3
Query: 222 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 380
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 381 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 488
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +3
Query: 222 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 380
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 381 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 488
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 94 NNYHKKAASK*KVSTFNKRKCYDAARSTSRRCTGVRASPSASSQQLKRPK 243
N+ ++K K S +KR+ +S+SRR +R S SQ+ KR K
Sbjct: 42 NSRKSSRSNKSKRSQRSKRRSAQRKKSSSRRKKKLRKEKSRKSQRSKRKK 91
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 251 TLTRNQTEPTESSGRPQSSSIHPLHESPACRAR 349
TLT T+ P+SS + P+ ESPA RAR
Sbjct: 43 TLTSQDRRDTQGCQYPRSSEL-PISESPAPRAR 74
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 454 SISRTTSSAATLSPTFLSNLTSPSETESGKLG 359
++ + SAAT+SP+ ++L SP+ T SG G
Sbjct: 206 TLRNNSVSAATVSPSDDNSLNSPALTSSGSAG 237
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 454 SISRTTSSAATLSPTFLSNLTSPSETESGKLG 359
++ + SAAT+SP+ ++L SP+ T SG G
Sbjct: 177 TLRNNSVSAATVSPSDDNSLNSPALTSSGSAG 208
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 454 SISRTTSSAATLSPTFLSNLTSPSETESGKLG 359
++ + SAAT+SP+ ++L SP+ T SG G
Sbjct: 206 TLRNNSVSAATVSPSDDNSLNSPALTSSGSAG 237
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +3
Query: 249 APLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGD-----VKLDKKV 413
AP A + QP+ VA+ Q + P TTP+ E D ++ K +
Sbjct: 415 APYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSAQWMEYYKSI 474
Query: 414 G--DSVAADEVVLEIETDKTAIPVMAPGHGVIKEL 512
G D A E ++ + + A + PG G+I+++
Sbjct: 475 GAHDKAEAVEAQMKKKKAEAAARAVVPG-GLIQQM 508
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +3
Query: 249 APLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGD-----VKLDKKV 413
AP A + QP+ VA+ Q + P TTP+ E D ++ K +
Sbjct: 478 APYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSAQWMEYYKSI 537
Query: 414 G--DSVAADEVVLEIETDKTAIPVMAPGHGVIKEL 512
G D A E ++ + + A + PG G+I+++
Sbjct: 538 GAHDKAEAVEAQMKKKKAEAAARAVVPG-GLIQQM 571
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +3
Query: 249 APLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGD-----VKLDKKV 413
AP A + QP+ VA+ Q + P TTP+ E D ++ K +
Sbjct: 456 APYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSAQWMEYYKSI 515
Query: 414 G--DSVAADEVVLEIETDKTAIPVMAPGHGVIKEL 512
G D A E ++ + + A + PG G+I+++
Sbjct: 516 GAHDKAEAVEAQMKKKKAEAAARAVVPG-GLIQQM 549
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 221 VNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPA 337
V+ S + TL + P SS P SSS P +SPA
Sbjct: 359 VSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA 397
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 221 VNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPA 337
V+ S + TL + P SS P SSS P +SPA
Sbjct: 566 VSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA 604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,251,821
Number of Sequences: 27780
Number of extensions: 305743
Number of successful extensions: 1221
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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