Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4e22
(674 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 27 0.16
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.50
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.50
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 25 0.66
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 24 1.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 3.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 8.1
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 8.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.1
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 543 QPSGLEWSRYHREFEELYFIAGGGFGSVFKARHRL 647
+P G++ +R R F+ Y + G+GS K RH L
Sbjct: 36 KPKGID-NRVRRRFKGQYLMPNIGYGSNKKTRHML 69
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.4 bits (53), Expect = 0.50
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 393 LHSMNLIDNSYAMGEFEAMRSQYQRALYQLVTVASGTEIPIILPATWPIVQPSG 554
L N I + A+R +Y Q+ A+ + I+L W I++P G
Sbjct: 599 LTKTNRIARIFDSASRTAVRPRYISPASQVCIAAALIALQIVLTLVWMIIEPPG 652
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.4 bits (53), Expect = 0.50
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 393 LHSMNLIDNSYAMGEFEAMRSQYQRALYQLVTVASGTEIPIILPATWPIVQPSG 554
L N I + A+R +Y Q+ A+ + I+L W I++P G
Sbjct: 689 LTKTNRIARIFDSASRTAVRPRYISPASQVCIAAALIALQIVLTLVWMIIEPPG 742
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 25.0 bits (52), Expect = 0.66
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = +3
Query: 174 WKALATVKSFDLGISASHHESFVQQSRQQIDVINAPTTTPISLLVQSLVKQLCSLLQKDS 353
W +A V+ + L I + +SF Q + P T ++ +S Q L S
Sbjct: 199 WVYIADVEGYALIIYNNADDSF--QRLTSSTFVYDPRYTKYTINDESFSLQDGILGMALS 256
Query: 354 IIANQLYNKICEKLHSMNLIDNS-YAMGEFEAMRSQYQRALYQLVTVASGTEI 509
LY H++N ++ + G+F+A QYQ A L T AS I
Sbjct: 257 HKTQNLYYSAMSS-HNLNYVNTKQFTQGKFQANDIQYQGASDILWTQASAKAI 308
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 597 FIAGGGFGSVFKARHRLDGVEYAVK 671
F+ GGFG V+KA ++ G + A K
Sbjct: 72 FLGSGGFGIVYKALYK--GEQVAAK 94
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 186 ATVKSFDLGISASHHESFVQQSRQQIDVINA--PTTT 290
+ VKS +L + E+ ++ +QID + A P TT
Sbjct: 323 SVVKSSELAVRIQRQENNIRPMVKQIDTVAAEWPATT 359
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/53 (20%), Positives = 21/53 (39%)
Frame = +3
Query: 393 LHSMNLIDNSYAMGEFEAMRSQYQRALYQLVTVASGTEIPIILPATWPIVQPS 551
L N I + + A R + QL+ + + I++ W I+ P+
Sbjct: 740 LTKTNRISRIFNASKHSAKRPSFISPRSQLIICSGLVFVQILINGVWMIIDPA 792
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 435 LP*HTNCQSSSYYE 394
LP H NC SS + E
Sbjct: 61 LPGHINCDSSKFEE 74
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 354 YCLFVTMNTIV 322
YCLF +NTIV
Sbjct: 148 YCLFSFLNTIV 158
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 425 IRIVNQVHTMKFLT 384
I IVNQ H ++F+T
Sbjct: 480 IGIVNQFHILQFIT 493
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,053
Number of Sequences: 438
Number of extensions: 3300
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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