Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4e18
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-36
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-36
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 120 1e-27
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 9e-19
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 65 5e-11
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 42 7e-04
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 35 0.078
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 32 0.42
SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 30 2.2
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 29 3.9
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10) 28 9.0
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 28 9.0
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 149 bits (362), Expect = 2e-36
Identities = 77/165 (46%), Positives = 103/165 (62%)
Frame = +1
Query: 220 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 399
W A+K H Y ++ E+ R I+ + I HN+ G S+KL MN GDM E
Sbjct: 29 WKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLE 84
Query: 400 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCG 579
+T+ G K KH ++ +GA F+ PANVK+ + +DWR G VT +K+QG+CG
Sbjct: 85 ISQTLLGL-KLKKHAES------QPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCG 137
Query: 580 SCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRG 714
SCW+FSTTGALEGQHFR++G LVSLSEQNL+DCS +YG + G
Sbjct: 138 SCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGG 182
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 692 GNNGCNGGLMDNA 730
GNNGC GGLMDNA
Sbjct: 175 GNNGCEGGLMDNA 187
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 149 bits (361), Expect = 2e-36
Identities = 76/172 (44%), Positives = 105/172 (61%)
Frame = +1
Query: 199 FDLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKY 378
FD +++W A+KL H Y + E+ R I+ ++ I KHN + S+ L MN
Sbjct: 240 FDEDEQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGH----SFTLAMNHL 295
Query: 379 GDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 558
GD+ EF G H N K GS F++P++V++P+ VDWRK G VT +
Sbjct: 296 GDLTQDEFRYFYTGMRS---HYSNYTKKQGSA----FLAPSHVQVPDTVDWRKEGYVTPV 348
Query: 559 KDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRG 714
K+QG+CGSCW+FSTTG+LEGQ+F+++G LVSLSEQNL+DCS YG Q G
Sbjct: 349 KNQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGG 400
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 692 GNNGCNGGLMDNA 730
GNNGC GGLMD A
Sbjct: 393 GNNGCQGGLMDYA 405
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 120 bits (289), Expect = 1e-27
Identities = 61/118 (51%), Positives = 76/118 (64%)
Frame = +1
Query: 361 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 540
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW +
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDWSQK 52
Query: 541 GAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRG 714
G VT +K+QG+CGSCW+FSTTG++EGQHFR++G LVSLSEQNLIDCS YG Q G
Sbjct: 53 GYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYGNNGCQGG 110
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 692 GNNGCNGGLMDNA 730
GNNGC GGLMDNA
Sbjct: 103 GNNGCQGGLMDNA 115
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 91.1 bits (216), Expect = 9e-19
Identities = 54/159 (33%), Positives = 81/159 (50%)
Frame = +1
Query: 238 QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 417
+H+ NY+ E + R + + + I N+++ Y L MN GD E ++ +
Sbjct: 562 KHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRH----AGYYLAMNHLGDRSDKE-LRVLR 616
Query: 418 GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFS 597
G T +N L K ++ N +P++++W GAVT +KDQ CGSCWSF
Sbjct: 617 GRRYTKGYNGGLPYKPD-------MASIN-DVPDEMNWVIRGAVTPVKDQAVCGSCWSFG 668
Query: 598 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRG 714
TTG +EG F ++ YL LS+QNL+DCS G G
Sbjct: 669 TTGTIEGTLFLKTKYLTRLSQQNLMDCSWGEGNNACDGG 707
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = +1
Query: 505 VKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSE 684
V LP VDWRK GAV +K QG CGSC++F+ GALEG HF Q+G + LSEQ ++DC+
Sbjct: 497 VPLPPHVDWRKAGAVNSVKSQGICGSCYAFAVAGALEGAHFIQTGLKLDLSEQQIVDCTW 556
Query: 685 QYGEQRLQRG 714
+G + + G
Sbjct: 557 GFGNRGCKGG 566
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 1188 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 1243
Query: 382 DMLHHEFVKTMNGFNKTAKHNKN 450
D+ EF + + +K N
Sbjct: 1244 DLTDDEFKSYKDALDDESKDVMN 1266
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 415 NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTD 555
N NK +H K ++ K K S ++P+Q+DWR +G TD
Sbjct: 1386 NRKNKKKEHKKRMHAK-------KKRSKRMFEVPDQLDWRNYGNKTD 1425
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 81.0 bits (191), Expect = 9e-16
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +1
Query: 565 QGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRG 714
Q +CGSCW+FS+TG+LEGQHFR++G LVSLSEQNL+DCS++YG + G
Sbjct: 342 QCQCGSCWAFSSTGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNNGCEGG 391
Score = 64.9 bits (151), Expect = 6e-11
Identities = 41/119 (34%), Positives = 60/119 (50%)
Frame = +1
Query: 217 EWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHH 396
+W A+K H Y E ED R I+ ++ I+ KHN + SYKL MN + D+
Sbjct: 180 QWHAWKDFHGKTYTGEEED-LRRAIWNDNLEIVKKHNAENH----SYKLDMNHFADLTVT 234
Query: 397 EFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGK 573
EF + G+ + S G+ F+ +NV+LP +VDWR G VT +K+Q K
Sbjct: 235 EFKQRFMGYRAASN----------STGGSTFLPLSNVQLPAEVDWRDKGFVTAVKNQEK 283
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 692 GNNGCNGGLMDNA 730
GNNGC GGLMD A
Sbjct: 384 GNNGCEGGLMDYA 396
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 65.3 bits (152), Expect = 5e-11
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
D V +++ F+ QH YE + E R I+ + I N++ + YKL +N +
Sbjct: 38 DPVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS----LPYKLELNHFP 93
Query: 382 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPE-QVDWRKHGAVTDI 558
D+ EF + +K N + N + E + D GAV
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMNDH-------DDVIDDDVNDETQEDEEDEPSDGAVNPA 146
Query: 559 KDQGKCGSCWSFSTTGALEGQHFRQSGY 642
K QG CGSCW+F+T GA+E HF Q G+
Sbjct: 147 KGQGTCGSCWAFATAGAVEAAHFIQEGF 174
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 58.4 bits (135), Expect = 6e-09
Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query: 436 KHNKNLYMKGGSVRGAKF-ISPANVKLPEQVDWRKH-GAVTDIKDQGKCGSCWSFSTTGA 609
+HN Y++ + + K+ ++P + ++ +H GAV+ ++ QG CGSC++ + GA
Sbjct: 286 RHNMR-YIRSINRKNLKYKLAPNHFVDLTDGEYDQHKGAVSPVRGQGICGSCYALAAVGA 344
Query: 610 LEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
+EG +F ++G L LS Q +IDCS G + + G + + +
Sbjct: 345 VEGAYFMKTGKLKELSAQQVIDCSWGSGNRGCKGGYYNKAM 385
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 208 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 387
++ + ++ QH Y+SE E + R I+ + I N+K + YKL N + D+
Sbjct: 257 IERMYRKYQGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKN----LKYKLAPNHFVDL 312
Query: 388 LHHEF 402
E+
Sbjct: 313 TDGEY 317
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +1
Query: 367 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA 546
MN++ DM EF + A + RGA F++P N++LP +VDWR+ G
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQQGY 51
Query: 547 VTDIKDQGK 573
VT +K+QGK
Sbjct: 52 VTPVKNQGK 60
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 529 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQH--FRQSGYLVSLSEQNLIDCSEQYG 693
W + +++DQG CGSCW+F A+ ++ + + +S ++L+ C E G
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAFGAVEAMSDRYCIHSEGKVMPHISAEDLLSCCETCG 151
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 35.1 bits (77), Expect = 0.059
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 93
Query: 382 DMLHHEFVKTMNGFNKTAKHNKN 450
D+ EF + +K N
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMN 116
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 34.7 bits (76), Expect = 0.078
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I ++ + YKL N +G
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRR----SLPYKLEPNHFG 93
Query: 382 DMLHHEF 402
D+ EF
Sbjct: 94 DLTDDEF 100
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I N+ + YKL N +
Sbjct: 209 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNR----CSLPYKLEPNHFA 264
Query: 382 DMLHHEFVKTMNGFNKTAKHNKN 450
D+ EF + +K N
Sbjct: 265 DLTDDEFKSYKGALDDESKDVMN 287
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 382 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK-HGA--VT 552
D +H +K+ NG K++K + + R ++++ A KLP DWR +G +
Sbjct: 12 DKIHQ--MKSSNGGCYDRKYDKGIKPVIKTKRPHEYLNMA--KLPTSFDWRDVNGTNYAS 67
Query: 553 DIKDQG---KCGSCWSFSTTGAL 612
++Q CGSCW+ TT A+
Sbjct: 68 TTRNQHIPQYCGSCWAHGTTSAM 90
>SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + G + +Q GQ L
Sbjct: 141 GKAWSASTTGARLGQHQPPGQGLVSINHGGKAWSASTTGARLVQHKPPGQGL 192
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + + G + Q GQ L
Sbjct: 83 GKAWSASTTGARLGQHQPPGQGLVSINHRGKAWSASTTGARLGQHQPPGQGL 134
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + + G + Q GQ L
Sbjct: 25 GKAWSASTTGARLGQHQPLGQGLVSINHRGKAWSASTTGARLGQHQPLGQGL 76
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + G + Q GQ L
Sbjct: 112 GKAWSASTTGARLGQHQPPGQGLVSINHGGKAWSASTTGARLGQHQPPGQGL 163
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + G + Q GQ L
Sbjct: 54 GKAWSASTTGARLGQHQPLGQGLVSINHWGKAWSASTTGARLGQHQPPGQGL 105
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + + G + Q GQ L
Sbjct: 523 GKAWSASTTGARLGQHQPPGQGLVSINHRGKAWSASTTGARLGQHQPLGQGL 574
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH LVS++ + + G + Q GQ L
Sbjct: 552 GKAWSASTTGARLGQHQPLGQGLVSINHRGKAWSASTTGARLGQHQPPGQGL 603
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGEQRLQRGAHGQRL 732
G WS STTGA GQH L S++ + + G + Q GQ L
Sbjct: 581 GKAWSASTTGARLGQHQPPGQGLFSINHRGKAWSASTTGARLGQHQPPGQGL 632
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -3
Query: 460 SCTDSCCVWQFCXXXXXXXRTRGGACLHTCSCPACKKRGPFRTSGCVWR*CACAQRISSC 281
SC++ CC+ Q C GG C+ C P KK T C R C SC
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTYRSC 179
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 431 LPNTTRICT*RVGASA-GLSSYRRPT*SCRSRWTGGSTAPSPTSRTKGSVAHAGPSARLE 607
L T+ I T R + A G SS P ++R T PSP RT S G S E
Sbjct: 969 LRRTSSIGTPRKKSFARGHSSVASPIRDKKTRRERSGTRPSPGERTGESSVKTGESRTFE 1028
Query: 608 LW 613
W
Sbjct: 1029 AW 1030
>SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10)
Length = 281
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 277 FRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 378
+RM + A+ + ++AK+ KY MG+ Y++G+ KY
Sbjct: 148 YRMGV-AKCRMVVAKYRMGVAKYRMGVAKYRMGVAKY 183
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 185 VLFSSLTWSRKSGVPSSCSTVSTTKARSKTISA*RY 292
VL L+W R + +C TV T R +T+ A Y
Sbjct: 336 VLVEQLSWFRPTSFVETCLTVRTIATRLRTLCAYAY 371
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,731,184
Number of Sequences: 59808
Number of extensions: 452675
Number of successful extensions: 1508
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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