Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4e16
         (261 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    52   8e-08
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    52   8e-08
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    48   2e-06
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    29   0.68 

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 52.4 bits (120), Expect = 8e-08
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +2

Query: 2   KVEFIGETSRQIIRNVKGPVRDGDILT 82
           KVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 27  KVEFLGEQNRQIIRNVKGPVREGDILT 53


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 52.4 bits (120), Expect = 8e-08
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +2

Query: 2   KVEFIGETSRQIIRNVKGPVRDGDILT 82
           KVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 27  KVEFLGEQNRQIIRNVKGPVREGDILT 53


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = +2

Query: 2   KVEFIGETSRQIIRNVKGPVRDGDILT 82
           +VEF+G+ SRQIIRNVKGPVR GDIL+
Sbjct: 26  RVEFLGDQSRQIIRNVKGPVRVGDILS 52


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 2   KVEFIGETSRQIIRNVKGPVRDGDI 76
           +V+ + +   Q +R VKGPVR GD+
Sbjct: 26  RVQLVDQPKMQFMRTVKGPVRLGDV 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,348,105
Number of Sequences: 53049
Number of extensions: 128825
Number of successful extensions: 205
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)