Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4e14
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.2  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    25   2.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.9  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    24   5.1  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   5.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.9  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 508 FRRRRQSIQNDDR*AFSWK*RKRYQANFNSKRNQLPR 618
           F+    SIQ  ++    WK R   Q +F  K++QL R
Sbjct: 869 FKNNVFSIQEVEQLVTLWKNRNDVQKSFREKQDQLAR 905


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 160 TNRNIVVPANN*EQYKNLKFYTTN 231
           TN  + VPAN    YKNL+   TN
Sbjct: 44  TNGRMSVPANREYHYKNLRDRYTN 67


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 160 TNRNIVVPANN*EQYKNLKFYTTN 231
           TN  + VPAN    YKNL+   TN
Sbjct: 4   TNGRMSVPANREYHYKNLRDRYTN 27


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 127 IQSACNNIISSVKKTNSKHKKFVYWPKDTNALVPLVWREMQR 2
           I S+C  I  S K  ++ HK FV   + T +     W++  R
Sbjct: 37  INSSCAQINESDKANDTNHKVFVQLNELTGSGENQEWKQTAR 78


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 5   LHLSPHQRHQRV 40
           LH SPHQ HQ+V
Sbjct: 73  LHHSPHQYHQQV 84


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 5   LHLSPHQRHQRV 40
           LH SPHQ HQ+V
Sbjct: 74  LHHSPHQYHQQV 85


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 381 TMDAKMQRLTLICRGAIPTGISAILL 304
           T+DA   RLT +    IP  I  + L
Sbjct: 633 TLDASFNRLTRVTPATIPNSIEFLFL 658


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 369 KMQRLTLICRGAIPTGISAILLPL 298
           K QRL LI +   P+G+S    PL
Sbjct: 470 KRQRLVLIPKPGKPSGVSCSYRPL 493


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,924
Number of Sequences: 2352
Number of extensions: 14615
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)