Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4e13
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   3.2  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   7.4  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   9.8  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 308 ARHDTKDRQK*RAPSTRNESLIGGITTLSDVKDNVRRRITYLILP 442
           +RH +    + R   T +  L+GG+T  S +++   R   + I+P
Sbjct: 632 SRHSSYTSHQSRISYTSHGDLLGGMTKESRLRNRSARNTNHSIVP 676


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/43 (20%), Positives = 18/43 (41%)
 Frame = +2

Query: 206 ADGYWEDQRRKTKRPQPN*MIRSNPIIFNTKLHSARHDTKDRQ 334
           +DG W +  R+  R   N         +   +H  +  ++D+Q
Sbjct: 187 SDGIWREVTRRKSRRSDNRRNERESTQYQQSVHQPQQSSRDQQ 229


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 694 MGKGKTVK*NYLVITIVLSIKNNKLISIFVCC 599
           + K +TV   Y+ + +   IK NKL+   V C
Sbjct: 414 VNKVETVTDAYIKLELKSPIKRNKLMRFMVTC 445


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,888
Number of Sequences: 2352
Number of extensions: 13216
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)