Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4e12
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030403-1|ABO52822.1|  832|Drosophila melanogaster FI01115p pro...    32   0.93 
BT010087-1|AAQ22556.1|  832|Drosophila melanogaster LD02463p pro...    32   0.93 
AE013599-429|AAM68901.1|  832|Drosophila melanogaster CG1624-PC,...    32   0.93 
AE013599-428|AAF59245.2|  832|Drosophila melanogaster CG1624-PB,...    32   0.93 
AE013599-427|AAF59246.2|  832|Drosophila melanogaster CG1624-PA,...    32   0.93 
AY060421-1|AAL25460.1|  651|Drosophila melanogaster LD39167p pro...    31   1.6  
AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p pro...    29   5.0  
AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-P...    29   5.0  
AE014298-2879|AAF48976.1|  724|Drosophila melanogaster CG14219-P...    29   5.0  

>BT030403-1|ABO52822.1|  832|Drosophila melanogaster FI01115p
           protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -2

Query: 718 CLQLISVQHHNGQTIAIAT--HRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQMHNV 545
           C+ L+ V++ N  +++ AT  H     +  + +C+  + HV + +R  N+  +     ++
Sbjct: 524 CMDLVKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSL 583

Query: 544 KNKLGRRRV 518
           K K GR+ V
Sbjct: 584 KFKFGRKGV 592


>BT010087-1|AAQ22556.1|  832|Drosophila melanogaster LD02463p
           protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -2

Query: 718 CLQLISVQHHNGQTIAIAT--HRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQMHNV 545
           C+ L+ V++ N  +++ AT  H     +  + +C+  + HV + +R  N+  +     ++
Sbjct: 524 CMDLVKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSL 583

Query: 544 KNKLGRRRV 518
           K K GR+ V
Sbjct: 584 KFKFGRKGV 592


>AE013599-429|AAM68901.1|  832|Drosophila melanogaster CG1624-PC,
           isoform C protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -2

Query: 718 CLQLISVQHHNGQTIAIAT--HRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQMHNV 545
           C+ L+ V++ N  +++ AT  H     +  + +C+  + HV + +R  N+  +     ++
Sbjct: 524 CMDLVKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSL 583

Query: 544 KNKLGRRRV 518
           K K GR+ V
Sbjct: 584 KFKFGRKGV 592


>AE013599-428|AAF59245.2|  832|Drosophila melanogaster CG1624-PB,
           isoform B protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -2

Query: 718 CLQLISVQHHNGQTIAIAT--HRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQMHNV 545
           C+ L+ V++ N  +++ AT  H     +  + +C+  + HV + +R  N+  +     ++
Sbjct: 524 CMDLVKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSL 583

Query: 544 KNKLGRRRV 518
           K K GR+ V
Sbjct: 584 KFKFGRKGV 592


>AE013599-427|AAF59246.2|  832|Drosophila melanogaster CG1624-PA,
           isoform A protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -2

Query: 718 CLQLISVQHHNGQTIAIAT--HRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQMHNV 545
           C+ L+ V++ N  +++ AT  H     +  + +C+  + HV + +R  N+  +     ++
Sbjct: 524 CMDLVKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSL 583

Query: 544 KNKLGRRRV 518
           K K GR+ V
Sbjct: 584 KFKFGRKGV 592


>AY060421-1|AAL25460.1|  651|Drosophila melanogaster LD39167p
           protein.
          Length = 651

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -2

Query: 718 CLQLISVQHHNGQTIAIAT--HRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQMHNV 545
           C+ L+ V++ N  +++ AT  H     +  + +C+  + HV + +R  N+  +     ++
Sbjct: 524 CMDLVKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSL 583

Query: 544 KNKLGRR 524
           K K GR+
Sbjct: 584 KFKFGRK 590


>AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p
           protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 675 IVWPLW-CWTEISCKHGHGSV 734
           I WPL  CW   +C HG+G +
Sbjct: 586 IAWPLGLCWVVFACMHGYGGL 606


>AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-PA
           protein.
          Length = 713

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 675 IVWPLW-CWTEISCKHGHGSV 734
           I WPL  CW   +C HG+G +
Sbjct: 575 IAWPLGLCWVVFACMHGYGGL 595


>AE014298-2879|AAF48976.1|  724|Drosophila melanogaster CG14219-PA
           protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 675 IVWPLW-CWTEISCKHGHGSV 734
           I WPL  CW   +C HG+G +
Sbjct: 569 IAWPLGLCWVVFACMHGYGGL 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,470,335
Number of Sequences: 53049
Number of extensions: 768869
Number of successful extensions: 1971
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)