Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4e07
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.7  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 403 FHFNYSQEFGQLSKQQRSSKVLRSQLRRH 317
           FHFN  QEF Q+  ++    V   +   H
Sbjct: 134 FHFNILQEFIQIFNEETKRLVEDLEAESH 162


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 532 QFYCFYGRVASVAIHLSHFSFVQYS 458
           Q++C   R  +  I   H S  +YS
Sbjct: 383 QYFCLMARCLNTLIFYYHISTYEYS 407


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 403 FHFNYSQEFGQLSKQQ 356
           FHFN  QEF Q+  ++
Sbjct: 134 FHFNILQEFIQIFNEE 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,049
Number of Sequences: 336
Number of extensions: 3390
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)