Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d21
         (362 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.24 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   0.73 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   2.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   6.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   6.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   9.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   9.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   9.0  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 226 TSVGWWAPVRGGIGAHRCSEDGDWVST-QGRVP 321
           +S G ++ + GGI A +     DW+S+  G VP
Sbjct: 83  SSSGPFSSIGGGISASKRQRTDDWLSSPSGNVP 115


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 0.73
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -2

Query: 151 VDEELRTQNYFTQGIY-FHHLVFKS 80
           +DE   + NYF    Y FH++ F++
Sbjct: 561 IDESSNSSNYFANKTYDFHNMSFEN 585


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 17  ISINRPSCRNFLAAEF 64
           + I   SCRNF AA F
Sbjct: 296 VKIVDASCRNFTAARF 311


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 14/56 (25%), Positives = 22/56 (39%)
 Frame = -1

Query: 221 TSMNVPRPAQSRAAACPTLPGSTGR*RTPNAELFHPRHILSSSRF*KRPQSTRTQP 54
           T    PRP  +R  + P+  GS     TP    + P    S+++      +T   P
Sbjct: 403 TISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPP 458


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 13/43 (30%), Positives = 14/43 (32%)
 Frame = -2

Query: 289 RLPSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPPHAQHFP 161
           R   TG    HP   P   H   H  +    P  E P   H P
Sbjct: 223 RFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELPDLNHKP 265


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 13/43 (30%), Positives = 14/43 (32%)
 Frame = -2

Query: 289 RLPSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPPHAQHFP 161
           R   TG    HP   P   H   H  +    P  E P   H P
Sbjct: 115 RFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELPDLNHKP 157


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 12/43 (27%), Positives = 16/43 (37%)
 Frame = -2

Query: 280 STGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPPHAQHFPDRP 152
           +TG   + P + PT    WL+       PN   P       RP
Sbjct: 6   NTGNAGAPPQEMPTWFVRWLNSQQPRNVPNFAAPSTSTAVQRP 48


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 283 PSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNL 188
           PS+     H +   T  HW+L     P +P++
Sbjct: 445 PSSVLSHGHRVIYSTVGHWYLDCGFGPWKPSM 476


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 64  ELSREEVATXRSVDG 20
           E SREE  T   +DG
Sbjct: 246 EASREEYVTRHLIDG 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,729
Number of Sequences: 336
Number of extensions: 2213
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)