Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4d21
(362 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 29 1.5
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 29 1.5
03_03_0126 + 14665374-14665539,14665790-14666127 29 1.5
11_04_0475 - 18176578-18177252,18180101-18180664 28 2.0
03_06_0636 - 35215034-35215336,35215417-35215584,35215599-352157... 28 2.6
01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112 28 2.6
11_06_0232 + 21559467-21559532,21559586-21560200 27 3.4
06_02_0085 + 11555539-11555632,11555767-11555867,11556947-115570... 27 3.4
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820... 27 3.4
08_02_1565 + 27897683-27897742,27897879-27898009,27898168-278982... 27 4.5
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 27 4.5
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 27 6.0
12_01_0135 + 1042889-1044255,1045368-1045809 27 6.0
10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496 27 6.0
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 27 6.0
05_05_0210 - 23285241-23285338,23286297-23286447,23286660-232867... 27 6.0
03_06_0264 + 32738224-32738553,32739298-32739768,32739864-327400... 27 6.0
03_02_0411 + 8217324-8218172 27 6.0
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 27 6.0
01_05_0264 + 20168409-20168593,20168726-20169055,20170142-201706... 27 6.0
12_02_0227 - 15894357-15894494,15894587-15894655,15894837-158949... 26 7.9
08_02_0457 + 17377254-17377608,17377701-17377750,17380018-17380188 26 7.9
03_06_0361 + 33377781-33378458 26 7.9
02_05_1045 + 33739287-33739991 26 7.9
01_03_0270 + 14445240-14445464,14445490-14445655,14446193-144463... 26 7.9
>10_08_0584 + 18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Frame = -1
Query: 302 DTQSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAA---ACPTLPGSTGR*RTPN 132
D P S H P+ G + PRP +RA ACPT+PG+ P
Sbjct: 811 DEDDPRSAHP-HPVSTRPGREQGGEAPEPNDGPRPPTTRAGPLPACPTVPGAPDPQDGPG 869
Query: 131 AELFHPR 111
A PR
Sbjct: 870 ATAGRPR 876
>08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 210 CAPAGPI*SRRMPNTSRIDRSMKNSERRTISPKAYTFIISFLKASA 73
CAP SRR + S ++S RT+SP A+ +++ + S+
Sbjct: 1333 CAPGDDAWSRRATVIVPVPASCRSSSCRTLSPVAFAVLLTVTQGSS 1378
>03_03_0126 + 14665374-14665539,14665790-14666127
Length = 167
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 114 WVK*FCVRSSSSTGRSGKCWACGGSRLGRPGHIHRCSHQCRV--VGPCKGWDWC 269
W+K S++ TG G+ GG R+ + GH+H H CR+ + KG D C
Sbjct: 52 WLK--ATFSTTVTGFGGE----GGRRMQKKGHLHHHRHCCRLADLEEEKGEDEC 99
>11_04_0475 - 18176578-18177252,18180101-18180664
Length = 412
Score = 28.3 bits (60), Expect = 2.0
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Frame = -1
Query: 338 NAASTAGTLPWVDTQSPSSEHRCAPIPPLTGAHHPTLVATSM-NVPRPAQSRAAACP--T 168
++ STA + D PS+ AP PP P + + P RAA P
Sbjct: 9 SSVSTAADMDEDDDDEPSAASAAAPAPPAPAPAPPASASKVLEQEPEELPCRAADSPLSP 68
Query: 167 LPGSTGR*RT----PNAELFHPRHILSSSRF*KRPQSTR 63
P + G R P +++ P H+L + QS R
Sbjct: 69 QPSAAGTPRLLAAGPTIKVWDPCHVLLPPPSPHQSQSAR 107
>03_06_0636 -
35215034-35215336,35215417-35215584,35215599-35215799,
35215877-35215962,35216037-35216229,35216304-35216489
Length = 378
Score = 27.9 bits (59), Expect = 2.6
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = +1
Query: 46 LPRG*VLVDCGRF*KRDDESICLG*NSSAFGVLHRPVDPGSVGHAAALDWAGRGTFIDVA 225
L G VLV K DD +G S FG L+ V+ S+GH + AG
Sbjct: 95 LGAGQVLVIAADVVKEDDCRRLVGDTISFFGQLNHLVNTVSLGHDFCFEEAGDTVAFPHL 154
Query: 226 TSVGWWAPV 252
V +W V
Sbjct: 155 MDVNFWGNV 163
>01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112
Length = 200
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 196 AGRGTFIDVATSVGWWAPVRGGIGAHRCSEDGDWVSTQGRVPAVLAA 336
A RG + + S GW A GG G G V +VPA+ AA
Sbjct: 107 AHRGCYFSPSPSTGW-ASAHGGGGGGSWYASGSGVGRMVQVPAIDAA 152
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 27.5 bits (58), Expect = 3.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 329 STAGTLPWVDTQSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRP-AQSRAAACPTLPGST 153
S G VD + + A + P GA T++ PRP A++R A + PG+T
Sbjct: 103 SRGGAEEEVDGHTCCKSAQAASVHP-GGAKRQAAAGTTVT-PRPRARTRGAPASSFPGAT 160
Query: 152 GR*RTPN 132
RTP+
Sbjct: 161 TPQRTPD 167
>06_02_0085 +
11555539-11555632,11555767-11555867,11556947-11557056,
11557152-11557227,11557412-11557555,11558432-11558503,
11558601-11559470
Length = 488
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 181 PHAQHFPDRPVDEELRTQNYF---TQGIYFHHLVFKSVRSQQELSREEVATXRS 29
PH H P ++ + +QNY+ T +++ F+S S Q+ S V T +S
Sbjct: 331 PHTYHQPPYTIEPQHTSQNYYSTETPAAPYNYSNFQSYPSFQDSSVPSVPTHQS 384
>01_06_1201 -
35380338-35380496,35381200-35381322,35381521-35382066,
35382285-35382392,35382695-35383225,35383614-35383743,
35384225-35385081,35385303-35385408,35387119-35387230,
35389255-35389347,35389723-35389771,35389859-35389897,
35390671-35390757,35391613-35391873,35391957-35392166,
35392413-35393507
Length = 1501
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 317 TLPWVDTQSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 162
TLP +P S AP P GA P L M P P ++ AC +P
Sbjct: 745 TLPQRPQAAPCSLSGLAPFPLAAGASAPRLRLRRMLPPAPTRN-PGACRFIP 795
>08_02_1565 +
27897683-27897742,27897879-27898009,27898168-27898236,
27899859-27899930,27901006-27901078,27902324-27902402,
27903061-27903067,27904524-27904581,27905681-27905890
Length = 252
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 308 WVDTQSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRP 198
W+D S EH P P +G+ + TL + V P
Sbjct: 142 WIDMHQNSQEHIYNPAFPSSGSRYSTLKVEQLYVDLP 178
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 323 AGTLPWVDTQSPSSE-HRCAPIPPLTGAHHPTLVATSMNVPR 201
AGT P D +S + H P P GAH P + + +PR
Sbjct: 986 AGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPSGYPLPR 1027
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -1
Query: 266 PIPPLTGAHHPTL--VATS---MNVPRPAQSRAAACPTL 165
P P GAHHP AT + +P P + RA A P L
Sbjct: 9 PAAPRAGAHHPRRPNPATGLLRLRLPAPPRRRARAAPRL 47
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -1
Query: 266 PIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 162
P PP HP L+ P P + AA P P
Sbjct: 134 PAPPPPPPSHPALLPPDATAPPPPPTSVAALPPPP 168
>10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496
Length = 389
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Frame = -1
Query: 317 TLPWVDTQSPSSEHRCAPIPP-----LTGAHHPTLVATSMNVPRPAQSRAAACPTLPGST 153
TL + SPS + P + G PT T+ +P A T+PG+T
Sbjct: 258 TLTFCPASSPSGSQKSTTATPTPAAMMPGTGTPTTPTTATAMPGATMPGTATATTMPGTT 317
Query: 152 GR*RTPNAELFHP 114
P+ + P
Sbjct: 318 FTDAVPDTSMPMP 330
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 260 PPLTGAHHPTLVATSMNVPRPAQSRA-AACPTLPGS 156
PP G ++P A + P PA S A AA PT+P S
Sbjct: 11 PPAAGHYYPHQFAPNPP-PHPASSAADAAPPTIPAS 45
>05_05_0210 -
23285241-23285338,23286297-23286447,23286660-23286748,
23287108-23288394,23288460-23288516,23289446-23289644,
23290240-23290342,23291048-23291229,23291850-23291899,
23292192-23292360
Length = 794
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 289 RLPSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPP 179
RL GAH L+G H L R + G P PP
Sbjct: 61 RLEGAGAHSGDLLEGGGHYHVGLGRRLLSGGPGSHPP 97
>03_06_0264 +
32738224-32738553,32739298-32739768,32739864-32740007,
32740570-32740671,32741758-32741873,32741959-32742028,
32742308-32742376,32742898-32742948,32743038-32743196
Length = 503
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 230 LVATSMNVPRPAQSRAAACPT 168
L A+ + +PRPA+S AAA P+
Sbjct: 16 LTASRLRLPRPARSPAAATPS 36
>03_02_0411 + 8217324-8218172
Length = 282
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 205 PGRPNLEPPHAQHFPD 158
PGRP+L PP ++H P+
Sbjct: 6 PGRPSLPPPPSRHRPN 21
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 290 PSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 162
PS H A + L G+ P + +S ++P PA AAA P P
Sbjct: 109 PSQNHG-ARLMQLLGSSGPAHLDSSASMPPPASEFAAAQPPQP 150
>01_05_0264 +
20168409-20168593,20168726-20169055,20170142-20170670,
20170825-20170958,20171080-20171252,20171274-20171840,
20172487-20172716,20172954-20172995,20173096-20173224
Length = 772
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -1
Query: 332 ASTAGTLPWVDTQSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRP 198
AST PW+ S +C +P + H+ + + +PRP
Sbjct: 27 ASTLTWTPWMILHDSKSFSKCLLVPSIVHNHNIIIRSNVRIIPRP 71
>12_02_0227 -
15894357-15894494,15894587-15894655,15894837-15894902,
15895130-15895219,15895312-15895408,15896449-15896771
Length = 260
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 135 RSSSSTGRSGKCWACGGS 188
RS S G+CW+CG S
Sbjct: 64 RSLSDRAGGGECWSCGAS 81
>08_02_0457 + 17377254-17377608,17377701-17377750,17380018-17380188
Length = 191
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 135 ERRTISPKAYTFIISFLKASAVNKNS 58
ERR ++P A FIIS K SA+++ +
Sbjct: 16 ERRPLNPSAKGFIISLGKHSAISQGT 41
>03_06_0361 + 33377781-33378458
Length = 225
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 209 VPRPAQSRAAACPTLPG 159
VPR + AAACP PG
Sbjct: 38 VPRAGDAAAAACPAYPG 54
>02_05_1045 + 33739287-33739991
Length = 234
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -1
Query: 254 LTGAHHPTLVATSMNVPRPAQSRAA---ACP 171
L+G HPTLV + +PR R A CP
Sbjct: 16 LSGGDHPTLVGVPLPLPRRLVDRGAEVEGCP 46
>01_03_0270 +
14445240-14445464,14445490-14445655,14446193-14446341,
14446634-14446674,14447683-14447755
Length = 217
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +1
Query: 235 GWWAPVR--GGIGAHRCSEDG 291
GWW PVR G G+ R ++DG
Sbjct: 156 GWWDPVRIEGAAGSGREADDG 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,552,890
Number of Sequences: 37544
Number of extensions: 281540
Number of successful extensions: 1039
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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