Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d21
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457566-1|AAL68796.1|  147|Anopheles gambiae multiprotein bridg...    24   1.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   2.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   3.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   3.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   4.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    22   6.2  
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           22   6.2  

>AF457566-1|AAL68796.1|  147|Anopheles gambiae multiprotein bridging
           factor-like proteinprotein.
          Length = 147

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = -3

Query: 171 NTSRIDRSMKNSERRTISPKAYTFIISFLKASAVNKNSAARKL 43
           NT+++DR       +T++P     I+   +A  +++   A ++
Sbjct: 57  NTAKLDRETDELRHKTLAPSVAKLIMQGRQAKGLSQKDLATQI 99


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
 Frame = +3

Query: 150 TGRSGKCWACGGSRLGRPGHIHRCSHQ--CRVVGPCKGWDWCAPVLGRRRLGIYPGEGTR 323
           TG  G C  CG +R G   +  RC      R  G C     C PV G R L     EG R
Sbjct: 361 TGHGGHCIDCGANRDG--PNCERCKENFFMREDGYCINCG-CDPV-GSRSLQC-NAEG-R 414

Query: 324 CTC 332
           C C
Sbjct: 415 CQC 417


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -1

Query: 311 PWVDTQSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 162
           P+ + +  S  H C       G  HPT    + N PRP        PT+P
Sbjct: 293 PYCEGREASFVHNC-----FEGETHPT----TQNKPRPGIVAPTTIPTVP 333


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 151 PVDPGSVGHAAALDWAGRG 207
           P +PGSV     LD AG+G
Sbjct: 468 PGEPGSVRPICLLDGAGKG 486


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 85  KSVRSQQELSREEVATXRSVDGNNPKE 5
           +S+R +QEL REE    ++ D    +E
Sbjct: 838 RSLRQKQELEREEFKRRQAEDRRRMEE 864


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 15/55 (27%), Positives = 20/55 (36%)
 Frame = -2

Query: 289 RLPSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPPHAQHFPDRPVDEELRTQN 125
           R P+T     +  + PTT H    R   P  P        H    PV++ L   N
Sbjct: 308 RTPATSTEHRYTTRTPTTTHRLAARTSTPPDPETTSSQQCH---PPVNDTLEAPN 359


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 141 SSSTGRSGKCWAC 179
           S +TG SG C AC
Sbjct: 71  SKTTGNSGNCIAC 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,801
Number of Sequences: 2352
Number of extensions: 9586
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)